Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0754 ATGGTGGATAAAGCGGAGTCCATTCCTGATATATGCCAATGGTTAGACTTCAGTAAGCTGTGCTTTGTTCTGTTAGACATTCGGGACCTGGGATTGGTTAGATTCCTAGGGTTTGACATGCATTGCCGACAGTTCAATGAATGGCTTACTGCTCATAATGCTGGATGCATCTTTGCCATGAAGTCCCTCAATTGTGAGAGGAGTGACCAATTGCGAGAGCTTCACAAGTCCCTCAAAACTGCAGAAACCAGCCCACAAACTAAAAGGCCTTCAGCAGCACTGTCCCCTGAAGTTCTCACAGATGCAGAGTGGTATTACTTGGTTTGCATGTCTTTCATATTCAACTTTGGCAAAGGGTAG 360 0.4528 MVDKAESIPDICQWLDFSKLCFVLLDIRDLGLVRFLGFDMHCRQFNEWLTAHNAGCIFAMKSLNCERSDQLRELHKSLKTAETSPQTKRPSAALSPEVLTDAEWYYLVCMSFIFNFGKG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0754 119 PANTHER TRANSCRIPTION FACTOR TT8 63 119 - -
Ssu5g0754 119 PANTHER TRANSCRIPTION FACTOR EGL1 63 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0754 Ssu-Chr5 19347879 19349360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0754 47 119 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 50.562 9.05e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0754 - - gmx:100795524 97.4413