Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0736 ATGGAAGATGTCTGGGAAGGCATAAACCTTGCATCCTTAAATGACCCCAAAACCCACatgaccaccaccaccacctccaaagGTGCAAATTTCCTAGACTTTCTAGCTCGACCCGGGACCAACTTCACCATAGCCGCAGACCCATCACCCTCCCCACCTCGTCCGGTCACTGCTCTGAGCCTGAGCACGCGTTCTGAGTTCCATTTTGACCCTCTCGCGCGCAAGGACCTGCAATTAGCTCAACCCCACCACAACAATGCCTCAAAGATTGAACCCTTTGGCAACCCGTTTCAGAAACGAGCTCACTCGTGCAACTCCTCGCCCGCTGTTGGGAATAAGAGGGCTCTCCCTTGTGGTACCGCCTCCGGGGACACGCGCAACACGAGGCTCATGAAGAATCGCGAATCTGCTGCCCGATCAAGAGCCAGAAAGCAGGAAactattgcttttttttttttttttctttttctgcctCGCTTttcaatgattatatatatatag 501 0.4591 MEDVWEGINLASLNDPKTHMTTTTTSKGANFLDFLARPGTNFTIAADPSPSPPRPVTALSLSTRSEFHFDPLARKDLQLAQPHHNNASKIEPFGNPFQKRAHSCNSSPAVGNKRALPCGTASGDTRNTRLMKNRESAARSRARKQETIAFFFFFLFLPRFSMIIYI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0736 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 129 143 IPR004827 GO:0003700|GO:0006355
Ssu5g0736 166 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 148 IPR043452 GO:0003700|GO:0045893
Ssu5g0736 166 PANTHER PROTEIN FD-LIKE 1 148 - -
Ssu5g0736 166 MobiDBLite consensus disorder prediction 101 124 - -
Ssu5g0736 166 Gene3D - 125 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0736 Ssu-Chr5 18906377 18906877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0736 1 146 bZIP Transcription Factor Family AT4G35900 34.615 2.94e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0736 K14432 - gmx:106796563 162.925