Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0674 ATGGAAGAAAGGGAATTTAatacttctcttctttttgttgAGAAAACTCATTCTTCCTTCTACTCCTTCACCTTATTTTGCATAATTCTTCCTTTAACCATGTTCGTCCCCGAGGCCGAGCTTCCTCTATGGGTGATCTGCTATGTTCCTGTATTTATGTCATTCCTCAACATTCTTCCAGCCCCaaaatcttttccttttatagTTCCATACCTTCTTTTTGAAAACACCATGTCTGTCACCAAATTCAATGCCATGGTCTCTGGACTCTTCCAATTAGGTAGTTCTTATGAATGGATTGTCACAAAGAAGGCTGGCAGGTCATCAGAGTCTGATTTGGTGTCGGCCGCAAAAAGGGAGGCTAAGTCAATAGAACAACAAAAGATCCATAGAGGAGCTTCTGACAGTGTACTTGTTGAGTCAAACCAATGTAAGGAACATAGAGAAACAAGTGCAACACCATGTTAA 468 0.3803 MEEREFNTSLLFVEKTHSSFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLVSAAKREAKSIEQQKIHRGASDSVLVESNQCKEHRETSATPC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0674 155 PANTHER - 13 152 - -
Ssu5g0674 155 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0674 Ssu-Chr5 16048963 16049430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0674 4 149 REM Transcription Factor Family AT2G24630 71.622 1.63e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0674 - - gmx:100797495 256.914