Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0669 ATGGAAGCTTCTAGAAGCTCCGATTCTAGAATAGAGAACTTGATTAGCGCCAAGAAATCCTTGAAGCTTAGCTTAGAGAAATCAAAATCGGTAGGTTTAGCGTTGCAGAAAGCGGGGCCAAGGTTAGACGAAATCAGGCAGAGGCTGCCGTCGCTCGGATCGGCGGTCCGGCCGATTCGCGCCGACAGGGACGCCCTCGCGGCGGTCGGCGGCCACATCAACCGCGCCGTCGGCCCCGCCGCTGCGGTGCTCAAGGTTTTCGACGCCGTCCACGGCCTCGAAAAATCGCTCCTCTCGGACCCCCGGACCGACCTAGCCGGTTACCTGTCGGTGCTGAAGCGCCTGCAGGAGGCGCTGAGGTTCTTGGGGGACAACTGTGGGTTGGCAATTCAGTGGCTGGAGGATATTGTTGAGTATTTGGAGGATAACTCTGTTGCCGATCAAGTTTATCTCGCGAATTTGAAGAAGGAGTTGAAGAATCTTCGCGAGTTGCAGCATGGTGAGCTTGATGGTGGACTGTTGGATGCTGCATTGTTTAAGTTGGAGGACGAATTTAGGCGGTTGTTGACTGAGAACAGTGTGCCGTTGCCTATGTCGGCCACACCGGCAGGGTGCGGCGATCAGGCGTGCATTGCGCCGTCGCCGTTGCCGGTGTCGGTTGTTCACAAGCTGCAGGCGATTCTCGGGAGGCTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCCAACGTGAGGGCGAGCTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCTGTGTCGGAGTTCAATGATGTGCAGAGCATTGAGGGGTACATAGCTCAGTGGGGGAGGCATTTGGAGTTCGCGGTGAAGCATTTGTTTGAGGCGGAGTATAAGCTTTGCAATGATGTGTTTGAAAGGATTGGGTTGGATGTGTGGATGGGTTGCTTTTCGAAGATTGCTGCGCAGGCCGGCATACTTGCGTTCCTTCAGTTTGGGAAGATGGTTACCGAGAGTAAGAAGGACCCCATTAAGCTTCTGAAGTTGTTGGACATTTTCGCGTCATTGAACAAGTTGAGACTGGATTTCAACCGGCTTTTCGGCGGCGCGCCGTGTGTTGAGATACAGAATTTGACGAGGGATCTTATCAAGAGGGTGATTGATGGGGCCGCGGAGATTTTCTGGGAGCTTCTGGTTCAGGTGGAGTTGCAGCGGCCGAATCCACCTCCTCAGGATGGCAGTGTGCCGAGATTGGTGAGCTTTATTACTGATTACTGTAACAAGCTCCTAGGAGAGGACTATAAACCAATATTGACCCAGGCACTGATCATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAGACTCCTTGTTAACGAGGTTTTGAACATAGTGAAGGCTGTTGAACTGAATGTGGAGACTTGGATCAAGGCTCATGAGGATCCTACGCTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAAGGGACAAAGCTTGGGGAGCTCTTGGGGGATTCTTGGTTGAGGGAGCATGAACAGTGTAAGGACTCTTACTCCACAAGCTTCTTGAGGGACAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCGGGAGGGCGTGCCACTGCCCGCGACCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTCGATGAGATGTATACAAAGCAGTCAAGTTGGATCATGCCAGAACGAGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTTTACCGCAGTTACATGCAGAATTATGGTCCTTTGGTTGAGCAAGACGCTAGCTCCACAAAATATGCAAAGTATACAGTGCAGAAGCTGGAGGAAATGCTCTTGTGTCTTTATCGGCCGAAGCCTGTAAGACATGGCAGCTTGAGAAGTCCAACATTTAGTGCAAAATATGGCAATGGAGTACCCGATCTTCGCAGAACAGCATCTGCAGTTGTTTTAGTTTCTCTTCTGAGATGGAAAACTGATTACTATCTACCTTGCACAGAGGTTTCTGCAAAAGCTATGCCATCTGTAAAACAATTTTGGGAGCAATTTAACCGTGTGAAACCAGAGGCCATTGTTGCTGCTGGCTGGTTTTTGGCCTCCGCCCCTGTAATTGTGGCTGTGTCAgctgcaatttctgcaatatcaAATATTGTGATGAAACTGCAACTgcaatcataa 2256 0.496 MEASRSSDSRIENLISAKKSLKLSLEKSKSVGLALQKAGPRLDEIRQRLPSLGSAVRPIRADRDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRTDLAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRELQHGELDGGLLDAALFKLEDEFRRLLTENSVPLPMSATPAGCGDQACIAPSPLPVSVVHKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGRHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKMVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAPCVEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRPNPPPQDGSVPRLVSFITDYCNKLLGEDYKPILTQALIIHRSWKRQSFQERLLVNEVLNIVKAVELNVETWIKAHEDPTLSNFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQCKDSYSTSFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPKPVRHGSLRSPTFSAKYGNGVPDLRRTASAVVLVSLLRWKTDYYLPCTEVSAKAMPSVKQFWEQFNRVKPEAIVAAGWFLASAPVIVAVSAAISAISNIVMKLQLQS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0669 751 Pfam Exo70 exocyst complex subunit 283 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu5g0669 751 Gene3D Exocyst complex component Exo70 81 649 - -
Ssu5g0669 751 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 665 IPR004140 GO:0000145|GO:0006887
Ssu5g0669 751 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 10 665 - -
Ssu5g0669 751 SUPERFAMILY Cullin repeat-like 83 642 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0669 Ssu-Chr5 15781688 15785170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0669 1 676 EXO70 exocyst subunit family AT4G31540 73.256 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0669 K07195 - gmx:100796139 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0669 5 15781688 15785170 Ssu5g0669 5 15781688 15785170 ECH