Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0581 ATGTCCTTAATAGCAGAAGCACCTAACTTTCTTCAAGTATATTCCGATGGTTCTGTGAAACGTTTTAACCCTGAAATTGTCCCAGCCTCTTTAGAATCAGTCAATGGATACAAGTCCAAGGATGTGATCATCGACCCATCAAAACCTACAACCGGAAGAATCTTCCTTCCTGGTTCTCCTACTTCTTCAAAGAGACTTCCTCTCTTGGTTTATTTCCATGGTGGTGGCTTTTGTATTGGCTCCACCACATGGCTTGGCTACCATAATTTTCTTGGCGATTTTTCCGTCACATCACAATCCATTATCCTTTCTGTTGATTACCGTTTGGCTCCAGAGCATCGCCTCCCTATTGCCTATGAAGACTGTTACACCTCACTTGAGTGGCTTGGCGATCAAGTTTGTTGTGAACCCTTATTTCAGCAAGCAGACATAACTCGAGTGTTTCTCTCTGGAGACAGTGCTGGAGGTAACATTGCACATCATGTTGCCGTGAAGGCAATTCAAGACAATGGATGTCCTTTGAAAATTAAAGGGTTAATGCTCATACATCCTTACTTTGGTAGTGAGAACAGGACTAAGAAAGAGATGGCTGATGAAAGTATAGGGGATGTGGCCATGAATGATATGTTTTGGAGGCTAAGTATACCCAAGGGCTTAAACCGTGACTATTTTGGTTGTAATTTTGAGAAGCTAGACCTATCTACAAGTGTATGGTCTAAATTCCCAGCAATTGAGGTTTATGTTGCTGGTAAGGATTTTTTGAAGGAAAAGGGAGTAATGTATGTGGagtttttaaagaagaaagGGGTAAAAGAGGTGGAGATTGTGGAGGCAAAGGAAGAGCCACACgtatttcatgttttttatCCTGAATCTCGTGCAACTCGCCTACTCCAAAGCCAAATGAGTCGATTCATGGAGAAATATTAG 930 0.4086 MSLIAEAPNFLQVYSDGSVKRFNPEIVPASLESVNGYKSKDVIIDPSKPTTGRIFLPGSPTSSKRLPLLVYFHGGGFCIGSTTWLGYHNFLGDFSVTSQSIILSVDYRLAPEHRLPIAYEDCYTSLEWLGDQVCCEPLFQQADITRVFLSGDSAGGNIAHHVAVKAIQDNGCPLKIKGLMLIHPYFGSENRTKKEMADESIGDVAMNDMFWRLSIPKGLNRDYFGCNFEKLDLSTSVWSKFPAIEVYVAGKDFLKEKGVMYVEFLKKKGVKEVEIVEAKEEPHVFHVFYPESRATRLLQSQMSRFMEKY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0581 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 IPR033140 -
Ssu5g0581 309 Pfam alpha/beta hydrolase fold 69 286 IPR013094 GO:0016787
Ssu5g0581 309 PANTHER CARBOXYLESTERASE 13-RELATED 5 306 - -
Ssu5g0581 309 Gene3D alpha/beta hydrolase 5 307 IPR029058 -
Ssu5g0581 309 SUPERFAMILY alpha/beta-Hydrolases 26 309 IPR029058 -
Ssu5g0581 309 PANTHER ARYLACETAMIDE DEACETYLASE 5 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0581 Ssu-Chr5 12864751 12865680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0581 3 305 Carbohydrate Esterase AT5G16080 36.278 9.61e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0581 - - gmx:106796748 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0581 5 12864751 12865680 Ssu5g0581 5 12864751 12865680 ECH