Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g0534 | ATGAAAACGAAGCTTCTTCTTATGCTTCTCATGCTCCTCCTTATTCTCCACGAACCCATTTGGATTCTTGCCTCACCAAACCCTCTTGCTCCCTCACCTCAAGTTCCACCCTTTTCTCCATTTTCCTCTTCAATGTCTGCTTCCTCTCcagGAATTGTGATGGGGGCTGAACAGCAACAAGTGGATTCACACAAGAAAATGGTAATTGCTATTGCCGTAGCCAGCACTTCATTTGGTGCAGTCATTTTGTGTGTGTTGTGCATCTGGATTTACTACACCAAGTACCCTTTAAAATCCAACAAGAAAAACGTTCAAAGATCAGATGCTGAAAAAGGGCTAGCTTCAGCACCATTTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAGGGGTGTGTTCCAATAATAGATTATAAGCAAATAGAAAAAGCCACCGGCAATTTCAAGGAAATTAACATCTTGGGTGAGGGTGGTTTTGGATGCGTTTACAAGGCTCATTTGGATGATAATTTGGATGTTGCCGTTAAGAAATTGCACTGTGAAAATCAGTATGCTGAGCAAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGTTGTAGCAGTAACGACGATACAAGGATTATTGTCTATGAATTGATGCATAATGGATCATTGGAAACTCAATTACATGGACCTTCTCATGGCTCAGCATTGACCTGGCATTTGAGGATGAAGATTGCTCTTGACACAGCAAGGGGATTAAAATATCTGCATGAGCACTGTTATCCTCCGGTGATCCACAGAGATCTGAAATCTTCTAATATTCTTTTAGATTCAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCAATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACATTGGGTTACGTAGCCCCGGAGTATCTTTTAGATGgTAAATTGACTGATAAAAGCGATGTCTATGCTTTTGGAGTTGTGCTTCTGGAGCTTCTATTGGGAAAGAAGGCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCTAAGCTTCCAAACATCGTGGATCCTGTAATTAAGAATACAATGGACCCCAAGCACTTATACCAGGTTGCTGCTGTGGCCGTGCTATGCGTGCAACCAGAGCCAAGTTACCGTCCACTGATTGCAGATGTTCTCCACTCACTCATCCCTCTCGTGCCAGTTGAGCTTGGAGGAACACTCAGGGTTCCACAACTGCCGCAGCAAGTCTTACCCTCTGACCCACCTGTGGATCCTAGTCAATGA | 1356 | 0.4255 | MKTKLLLMLLMLLLILHEPIWILASPNPLAPSPQVPPFSPFSSSMSASSPGIVMGAEQQQVDSHKKMVIAIAVASTSFGAVILCVLCIWIYYTKYPLKSNKKNVQRSDAEKGLASAPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQEFENEVDLLSKIQHPNVISLLGCSSNDDTRIIVYELMHNGSLETQLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDSKFNAKLSDFGLAITNGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKAVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLRVPQLPQQVLPSDPPVDPSQ | 451 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g0534 | 451 | ProSitePatterns | Protein kinases ATP-binding region signature. | 155 | 178 | IPR017441 | GO:0005524 | |
Ssu5g0534 | 451 | Pfam | Protein kinase domain | 149 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0534 | 451 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 270 | 282 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu5g0534 | 451 | ProSiteProfiles | Protein kinase domain profile. | 149 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0534 | 451 | PANTHER | OS01G0750732 PROTEIN | 37 | 436 | - | - | |
Ssu5g0534 | 451 | SMART | serkin_6 | 149 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu5g0534 | 451 | Gene3D | Phosphorylase Kinase; domain 1 | 116 | 224 | - | - | |
Ssu5g0534 | 451 | CDD | STKc_IRAK | 155 | 422 | - | - | |
Ssu5g0534 | 451 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 419 | IPR011009 | - | |
Ssu5g0534 | 451 | Gene3D | Transferase(Phosphotransferase) domain 1 | 225 | 424 | - | - | |
Ssu5g0534 | 451 | PANTHER | BNAA04G14780D PROTEIN | 37 | 436 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g0534 | Ssu-Chr5 | 11714938 | 11719390 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g0534 | 30 | 365 | Receptor kinase-like Gene Family | AT1G80640 | 50.291 | 6.03e-102 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-X | Ssu5g0534 | Pkinase | 9.8e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g0534 | - | - | gmx:100785380 | 787.334 |