Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0520 ATGGAGGAGCACGTATCACCGGAGGTTGTGTGCGGCAACGACCACAAGTTTGCCTTGGACTGGTGGGCCCTTAGGATACTAGTCTACAAAATGCTCTTCAGTAAGACCCTATTAAGGGGAAGAACTGTTGTTCGAGAAGGATTAGACGAAGCGGTTGGGCTACACTCGCAACGTTACGAAGATCAAGGAGCACGAGTTTTTCCATGGAGTGAGATGGGACCTGTTGACCAGGGTGGTGCGGCAGCCGTTCATTCCAATAGGGAGGACAAGACCAGAGAAGTTTGGAAATAG 291 0.5052 MEEHVSPEVVCGNDHKFALDWWALRILVYKMLFSKTLLRGRTVVREGLDEAVGLHSQRYEDQGARVFPWSEMGPVDQGGAAAVHSNREDKTREVWK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0520 96 SUPERFAMILY Protein kinase-like (PK-like) 4 43 IPR011009 -
Ssu5g0520 96 MobiDBLite consensus disorder prediction 70 96 - -
Ssu5g0520 96 Gene3D Transferase(Phosphotransferase) domain 1 3 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0520 Ssu-Chr5 11225889 11226261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0520 2 41 AGC Kinase Gene Family AT1G51170 50.000 4.01e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0520 - K08286 gmx:100782070 61.6178