Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0493 ATGGCTCTCGTAGCCTTTGCTCTATTGATGCTCGCTTGCTCCTATTGGAGTCTCGCCAGGACCCAACACTCGgagaataataacaacaacaacgtCGTGAAAGAGGGTGATGATGACCCTCGAAACAAGGAACACCCCAAGGTCTACGAGGAGGAGATCCTAGTCATCATGGCCGGGGATCACAAACCAACGTTCTTGGCCACCCCTTCGTGCCCCAATAATTATTCATCCTCTTTTGCCCACGGGGCTTGTAACCATTTCGACAAACACCTTGAGGATTGCGACAGGTCCCAGAAAGAAATTACGGACAACCATGTTGTTGTTACGGATGCCACAAAAGAAAGTGGAAGTTCCCAACCCGAACAACGTAGTCGGTGA 378 0.4762 MALVAFALLMLACSYWSLARTQHSENNNNNNVVKEGDDDPRNKEHPKVYEEEILVIMAGDHKPTFLATPSCPNNYSSSFAHGACNHFDKHLEDCDRSQKEITDNHVVVTDATKESGSSQPEQRSR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0493 125 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 1 124 IPR040359 GO:0080143
Ssu5g0493 125 MobiDBLite consensus disorder prediction 108 125 - -
Ssu5g0493 125 MobiDBLite consensus disorder prediction 105 125 - -
Ssu5g0493 125 PANTHER DUMPER, PUTATIVE-RELATED 1 124 - -
Ssu5g0493 125 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0493 Ssu-Chr5 10405471 10405848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0493 1 70 Glutamine Dumper (GDU) Family AT5G57685 47.222 5.79e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0493 - - gmx:100306141 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0493 5 10405471 10405848 Ssu5g0493 5 10405471 10405848 ECH