Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0440 ATGCAACCCATTCCCTTCTTCTCCTCTCATTTCTATGTCATTGAAGGGTACTTGTACAATACTGAATCACCCAAGCAAAGGGAGAAGCCTGACATGTCCATATTCAAAAATGCTGTTCAGGATTGCCTTTCCTACGATCCCCCCAAAGTGCATAAACCAAGTAACAAAATCGTTACGAATAATTCCGAGATTGAAAAGTTTTCAAGCCTTCGAATAAGGAACCAATTATTAACCTCAACGGAGCTTAGGGAACACTTTTCAGACATTCATTTTGTTCTGTTATCAGTTATCAAaTGCTTATCAGAAGAACATGCAAGTAACAGTCTTCACTACTATGAAGTAAATGACGATTCTCCTATTGTTCAGGATGATGTCAGTTTATTTGATTACAATGTCCCTGAAAGACTAAATGAGCCAGCTCTTAAAGATTATGTTAGATTGATGAGTCGGTACCACTTGAGCCTCCTCTATTTTGGACGGCTTCACTTTGAATCACTTAACATATCCTGTTCTGTTAATCTTAGCATTGATCTTCCTCTTCCTTTGCATTTCATGGCGCAGGAGAGCCAACCAAAGTCCTTTAGAAAGGAGCTTTCCATGGAGTATGGCTACTTTGATCTAGGTGTTACAGATAATGGTGCAATATCAATCCCACATTCTTGA 663 0.3891 MQPIPFFSSHFYVIEGYLYNTESPKQREKPDMSIFKNAVQDCLSYDPPKVHKPSNKIVTNNSEIEKFSSLRIRNQLLTSTELREHFSDIHFVLLSVIKCLSEEHASNSLHYYEVNDDSPIVQDDVSLFDYNVPERLNEPALKDYVRLMSRYHLSLLYFGRLHFESLNISCSVNLSIDLPLPLHFMAQESQPKSFRKELSMEYGYFDLGVTDNGAISIPHS 220
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0440 Ssu-Chr5 9144235 9146394 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0440 16 100 Core DNA Replication Machinery Family AT2G20980 51.136 3.86e-20 85.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0440 K10736 - gmx:100527758 102.449