Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0429 ATGGGGAAACAGACTGTGCCGGTGAAGTCGGTGATCTACGCGCTCTCCCCTTTCCAGCAGAAGATAATGACGGGTCTCTGGAAGGACTTGCCGACGAAGATTCACCACAAGGTCTCCGAGAATTGGATCAGCGCCACTCTCTTGCTCGCTCCCCTCGTTGGCACCTACGCGTATGTTCAGAACTACCAGGAAAAGGAGAAGTTGGCTCACAGGTACTGA 219 0.5388 MGKQTVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISATLLLAPLVGTYAYVQNYQEKEKLAHRY 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0429 72 Gene3D - 2 72 IPR036642 GO:0005750|GO:0006122
Ssu5g0429 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Ssu5g0429 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
Ssu5g0429 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11 64 IPR036642 GO:0005750|GO:0006122
Ssu5g0429 72 PANTHER CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0429 Ssu-Chr5 8865043 8866212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0429 1 72 Chloroplast and Mitochondria Gene Families AT5G05370 75.000 4.03e-38 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0429 - - gmx:100779432 142.124