Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0419 ATGCCTATAGGCTATAGCTATAGGAAATTGAGACACTGGATTATGGCTCAGAAGAAAAGAGTCAAAGGAAAGCGAGCATTGTTCACCCTGCTGGCGTTAATAGGAGGATTATTGGGTTATCTTTATGGGCCCTATTGGGCGTTGAGAAAAGTTCCTGGCCCACCATCTCTGCCGCTGGTAGGACACCTTCCCTTGCTGGCTAAATACGGCCCTGATGTGTTCTCACTCCTCGCCAAACAATATGGCCCAATCTACAGCAGATTTCATATGGGAAGACAACCACTAATCTTGATAGCAGATCCAGAGCTTTGTAAAGAGGtgggaataaaaaaattcaaagacatTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCCTCTCCTCTTCACCAAAAAGGCCTCTTCTTCACCAGGGACTCACGATGGTCAACCATGCGAAACACCATCTTGTCAGTGTACCAGCCATCACACCTGGCTAGCTTAGTGCCAACAATGCAATCATTTATAGAATCCGCAACACAAAATCTTGACACCCCAAGAGAGGACATAATCTTTTCCAATCTTTCCCTAAGGCTAGCAACTGATGTGATTGGAGAGGCAGCATTTGGGGTCAACTTTGGTCTCTCTAAGCCCCATTCAGTTTGTGAAACAATCAAGGGTGTTAGCAATGTGAGAGATGATGATGGAGTATCAGATTTCATCAATCAACACATTTACTCCACAACACAGCTTAAGATGGACTTGTCTGGTTCCTTTTCCATTGTACTTGGTCTACTTGCCCCAATACTTCAGGAGCCATTTAGGCAGGTTTTCAAGAGAATACCAGGCACAATGGACTGGAAAATAGAGCGTACTAATGAGAAACTGAGTGGTCGTCTTGATGAGATTGTCAAGAGGAGAATGGAAGACAAGAACAGAACTTCAAAGAACTTCTTGTCACTCATTCTGAATGCAAGAGAATCAAAGACTGTATCAGAAAATGTCTTTTCACCTGACTACGTTTGTGCTGCTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTCACCTTGTCATCCGTTGTCTATTTGGTTGCTGGGCACCCAGAAGTCGAGAAAAAGTTGCTTCAAGAGATTGATGGATTTGGTCCAGCTGAAAGGACAGCCACTGCTCAAGATCTTCGTGACAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGATTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAgGGTACGTGGGTATGGTTAGCTCTTGGAGTTCTAGCGAAAGACCCAAGGAACTTTCCAGAGCCAGAACAGTTCAAACCAGAGAGGTTTGACCCCAAATGCGAAGAAATGAAGCGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCCCAGGCATGTATTGGTCAGAAATTTTCCCTGCAAGAGATCAAGCttactttgatttatttatacCGGAAATATGTGTTTCGTCATTCACTTGACATGGAAAAACCTGTAGAAATGGAATATGGTATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTCATAAGAAGAACGTAA 1620 0.4278 MPIGYSYRKLRHWIMAQKKRVKGKRALFTLLALIGGLLGYLYGPYWALRKVPGPPSLPLVGHLPLLAKYGPDVFSLLAKQYGPIYSRFHMGRQPLILIADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDTPREDIIFSNLSLRLATDVIGEAAFGVNFGLSKPHSVCETIKGVSNVRDDDGVSDFINQHIYSTTQLKMDLSGSFSIVLGLLAPILQEPFRQVFKRIPGTMDWKIERTNEKLSGRLDEIVKRRMEDKNRTSKNFLSLILNARESKTVSENVFSPDYVCAATYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKLLQEIDGFGPAERTATAQDLRDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEQFKPERFDPKCEEMKRRHPYAFIPFGIGPQACIGQKFSLQEIKLTLIYLYRKYVFRHSLDMEKPVEMEYGMVLNFKHGVKLRVIRRT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0419 539 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 Pfam Cytochrome P450 52 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 Gene3D Cytochrome P450 42 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 SUPERFAMILY Cytochrome P450 45 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0419 539 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 539 - -
Ssu5g0419 539 PANTHER THROMBOXANE-A SYNTHASE 25 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0419 Ssu-Chr5 8705953 8716054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0419 90 538 Cytochrome P450 AT2G26170 72.829 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0419 K20771 - gmx:100805689 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0419 5 8705953 8716054 Ssu1g3626 1 91764495 91773850 PCT