Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0284 ATGGAAAGTGGACTACCCTTCCTTGACTGTCTCTTGCAGCACACTCTCAGAAGCATTTGCTCATTTCCCACTTCTTCAACTTCCTCCAAGTGGGTGTACGCAGTCTTCTGGAGGATAGTACCCCGAAACTTTCCTCCTCCTAGGTGGGAATTTGGAGGGACAGCTCTCGATCGCTCCAAGGGAAATAAAAGAAACTGGATCCTTGTGTGGGAAGATGGGTTCTGCGATTTTAATGAATGTGAACAAGGGAGGAGTGGATACTTGAACCACAGGTTTGGAGCTGACGTATTCTTCAAAATGTCTCATGAGGTTTATAGTTATGGAGAAGGACTTCTGGGGAAAGTGGCCGCAGAGAATAGTCACAAGTGGGTTTACAGTGACATCCAAAATGGGTGTGAACCTAGCTACATTGGTGCGTGGAATGCTTCAATCGATCATCAACCAAGGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGACTATTGCTGTCATTGCTGTCAGAGAAGGCTTAGTACAACTTGGTTCATTTAACAAGATTGCTGAAGATCTCAATTTAGTGGTCAGCATTCAAAGGAAGTTCAGCTACCTCCACAGCATACCAGGTGTATTTTCCATTCAAAGACCACACCTACCCATTCAACATCCATGCACTGCTAAACCCAATCTTCAAATGTTGGAAAGCAATGAAGTGACTCTATCTGCCTATAATGCCAACCAAGTAACAAGAGTCAATGGACTTCATGAAGAAAGATCCAGCTTCTTTTCCATGATAGCCATCAACTTGGGTAGGAATCCACCACCCCAGAATGGAACAACAGCACAAGGGTCACCTCTTTGGTCAGCTCCACCTTCCTTGCCCAACATGTCTTGCAGTTTTGGAGCTATGCTATCAAAGCTCCCATCTGTAACTCCTTCCAATAATCCCACTCAAGTTCCTGAAACCAATAGGACCAACAGCCCAGGCCACAAAGTGAAGATTGAGAAGTGCAGATTTCATGTTGCTGATAATGGAGATCAGAACAAAAAGGCAGGGTGGTCCTAA 1044 0.4464 MESGLPFLDCLLQHTLRSICSFPTSSTSSKWVYAVFWRIVPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFNECEQGRSGYLNHRFGADVFFKMSHEVYSYGEGLLGKVAAENSHKWVYSDIQNGCEPSYIGAWNASIDHQPRTWEFQLNSGIQTIAVIAVREGLVQLGSFNKIAEDLNLVVSIQRKFSYLHSIPGVFSIQRPHLPIQHPCTAKPNLQMLESNEVTLSAYNANQVTRVNGLHEERSSFFSMIAINLGRNPPPQNGTTAQGSPLWSAPPSLPNMSCSFGAMLSKLPSVTPSNNPTQVPETNRTNSPGHKVKIEKCRFHVADNGDQNKKAGWS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0284 347 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 326 - -
Ssu5g0284 347 MobiDBLite consensus disorder prediction 302 320 - -
Ssu5g0284 347 MobiDBLite consensus disorder prediction 302 325 - -
Ssu5g0284 347 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 194 IPR025610 -
Ssu5g0284 347 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0284 Ssu-Chr5 5982853 5984755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0284 13 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.258 2.15e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0284 - - gmx:100807289 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0284 5 5982853 5984755 Ssu5g0284 5 5982853 5984755 ECH