Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0272 ATGAACCTGGCATGTCTTACTTATGGTGCTAAGGAGCAAGCCACTGTTCCTGGTGGCGGGCTTCATCCGATTACCCTTCGCGTGTTGGACTACGTCCACGCGATAAATTGGACAAAGCCTTCGGCGTTGTTTGTGGAAGTAGACAGGATAATAATAACAGAGCTTTTAGAGAGTAGTTTGGAAGCGATCTCCAAAATTTACAACAACCCTACTTTGGATTGGCTCGGCTCAAATTCAAGTTTGGGTAGATTTTCGTAA 258 0.4496 MNLACLTYGAKEQATVPGGGLHPITLRVLDYVHAINWTKPSALFVEVDRIIITELLESSLEAISKIYNNPTLDWLGSNSSLGRFS 85
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0272 Ssu-Chr5 5713271 5714257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0272 1 72 EXO70 exocyst subunit family AT5G58430 37.931 3.21e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0272 K07195 - gmx:100788390 93.2041