Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0173 ATGCAAGGCGTCCACGCGTCACATCTCTCACTCCACTCGGGTCCACCCATGAATCTCATCCGTCCAATTTCTCATGACATTCCATCGTGCAACGCGCACGCATCGACCTCACAATCTTCGCGAAGACATTTGGAATTTGGAGGAATCGCAATCCTCGTGACTCGTGAGCCGGTTACTCTTTCCCCCGGGTTTAAATCCCCGCGACGCGCACACGCTAGTCACCATTGCCGGAAAATGGCCTCCGACGGAGCAATTTCGGCGGCGACGAGTCGGAGAAAGCCGTCgtggagagagagggagaacaacagaagaagagaaagaagaagaagagcaatAGCAGCGAAAATATACTCAGGACTTCGAGCCATGTGGCATTTTGGGTGTTGTTCCCTGGAAATTTCATTAGTTGCATCAACTCTTGAACCTGGATTCATGGCTCTCATCAAAGATCTTAATAGAAATCATGTGGTTCCGCATTGA 480 0.4562 MQGVHASHLSLHSGPPMNLIRPISHDIPSCNAHASTSQSSRRHLEFGGIAILVTREPVTLSPGFKSPRRAHASHHCRKMASDGAISAATSRRKPSWRERENNRRRERRRRAIAAKIYSGLRAMWHFGCCSLEISLVASTLEPGFMALIKDLNRNHVVPH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0173 159 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 79 124 IPR033264 GO:0003700|GO:0006351|GO:0009742
Ssu5g0173 159 MobiDBLite consensus disorder prediction 77 106 - -
Ssu5g0173 159 MobiDBLite consensus disorder prediction 92 106 - -
Ssu5g0173 159 Pfam BES1/BZR1 plant transcription factor, N-terminal 90 123 IPR008540 -
Ssu5g0173 159 MobiDBLite consensus disorder prediction 1 23 - -
Ssu5g0173 159 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 79 124 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Ssu5g0173 BES1_N 3.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0173 K14503 - gmx:100785743 60.8474