Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0131 ATGCAGCAAGCAACGCACGAAACCAGGCGACCTACGGCTttcactcattttcttttctctctcacgTTTTGTGCTTCCTTCTCCGTGTCTCTGACTCTAGCTGAACCAGTTTTGCGAAGTCAGAGAAACAACGCAAGCAAGAAGAGTAacgaggaggaggaggaggaggagaactTCGCCGTCGTCGCCGCCATGGAGTTCGGAGCCGCCACCGCGACTCTCACGAAGAAGCTCTCGAACGGCTACGGCGTCTCCGGAAAATCCGCGTACGACGGCGTTTTCGCCACTCCGATTAAGCTCCGAGCTCCGAGTTTCTCCTCTCAGTTCGACGATTACCGCGAGATTTTCGGCTGCGCCGGAGCTTCGCTCGGTTCCTCGATTCCGATTCTCGAACTTCCGGAGCTCAACGACAGGAGAAAGAACGACGACGTTCGGCGCTCGAAGCTCGATTACACGAAGGTCTTCGGCGGGTTCGGGAATCTAGATGCTGCGGTGCCTTTCGAGGAGCTAGTTGCTGAGCCTAAAGAGAAAGATAGCTTCACAACACTGAGCAAGGTCAAAGGAGAAAACCAATCATGCCGGGAAGATCGTACTAATTGTTCAAAGGAAATTCCGGTGGCATCGTGGTCATCCAATGATGCCAAAAGGATCAATATGTCATATCATAAAGTTAGCCAAGGAAGTGAAACTGGAACAAATGGAACGACACATATTGCTCAACTCTCTGCTGTCCCTGCTTACAGTCAATTAATTGAAGAAGTCAATCCAGTGAAGATGAACAGAGCTAATAAGTCTATACCAGTAGCACGGGATACTTATTCTGGTAGTCATGGCAATGAGGGGATAAAAGAAAGTGTACATTCTACTAAATCGTTTACTGGTGCTTCACCTGATAATTCTAAGAAACAGTCTTCCAACAATGGAGTGAAAGTTAAAAATAGGTCTGATTCTATTGATCTGTTTTTTGATGCATGTGAGATTAGCGATGGAAGTAATGGAATGCATCATGTCAAAGCTCCTCTATCAGAGACTACATCAGGTAACTTGAATAATCGTAATGGTGATGCTATGAAATCAATGCCAACCAAATGCCAGACATCTAAAAGTAGTACATCTGAAGGTGTTGCTGGTCCTGATTCACCCTCATACTTCGATGACATGATAGACTCAAATTCAGAGGTAGCTGCTTCTGTAGCTGCTTTAAGAAAGGCAATAGAAGAGGCTCGAGTAAGAATGAAGGTTGCAGAAGAATTgatgagaagaaagaaagaaggttTTCCTTATTGTGTCAAACGTAAGTCTAATATTGAATTGAAAGCTGAGGGAAAAAAGGAGGCTAAAGTCACGTATAAAACAATGAAACTTGAAGAGATTAATACAAAGCAAACATTTGGAGAAATGGATGCTTTGCCGAATGCTTCTTCTGAGGTAGGGAAGTCAAAGATGAGAATAGGGCAAGTGAGGTCAGATGTGGGGGCAAAAGAAATGTGTGTGACTAAAGAAGCTGTACGGGAAGCACAGAAGAAATTGAAATCAACTCAAGTGAAACATAAGAAAGAGGTTGAACAGAAAGAAGCAGatcataaaggaaaaaattttgagCTTAAAGAGGcagaaaataataagaaagagcTGCACATTAAAAGCACAGATAGGAATGCCCCTGATAAACCAGAAGCATCTGATCATACAATAGAAATGGTTAAGGAATATTGGTGGCCAGAGAATAATGTAGAGAAGGTCCATGCAGATAATGAAGCAAGTGCATGCGAAGACCTTGTCCAGGAAACTAAACATAGGTGTCAAGAAGTAGTGGATGAAACAAAACTGATTCAGGAGACACTTGAAAATGGAACCATTGACAAAAGTTTGAAGGCTAATGGAAATGGGAAAGTTGAGAATAAGGTTACACCTTTTCATGAACCAGAAGACTATGAAAGCAACCTTGGTGGGCTAGGGCTAATAACAGGAAATGGGAAAAATGTTGCTTGTAAGCCAGAAGATGGTAACAAATTTGAAGGGTCCTTTGAACTGGAAGaatgcaaaataaatttgagtgcTGTTCAGGAACTGGGAGAGGTTGAGAAGAACATTACCCAAGAGCAAAAAGGAAGTGAGGATAGAGTTTCAGTGTCCAGTGAGCTGGAAGAATATGAATTGACAGAGATTCTGGAGCCACTTAACAATGAGAGTGTGTGCAGTCAACATGGCTCAGATTTGATAAGTATGGATAAAGAGATAGATAACTTGGGGTGTTTAGAGGATAGAAACAAGAGAAATGAATCTGGTTTTTTGGATATCAATCAAGAGAACGAACATTCCTGTCAGAGAGAAGCCACTGATAATATGTTTAGCAATATCTATGTGCAGGAAATACTGGAGGATATTGTGGACCATATTCATAATGAGGAAGAAATTTATGAAAGAAATACTAAGGAAAGTAATTTAGATGGAAATGGTATGGTTTTAGATGCCCAAGCAATTGAGAATGAATTTGAAGGAGCCACTCATCTGATAGGATGA 2523 0.3999 MQQATHETRRPTAFTHFLFSLTFCASFSVSLTLAEPVLRSQRNNASKKSNEEEEEEENFAVVAAMEFGAATATLTKKLSNGYGVSGKSAYDGVFATPIKLRAPSFSSQFDDYREIFGCAGASLGSSIPILELPELNDRRKNDDVRRSKLDYTKVFGGFGNLDAAVPFEELVAEPKEKDSFTTLSKVKGENQSCREDRTNCSKEIPVASWSSNDAKRINMSYHKVSQGSETGTNGTTHIAQLSAVPAYSQLIEEVNPVKMNRANKSIPVARDTYSGSHGNEGIKESVHSTKSFTGASPDNSKKQSSNNGVKVKNRSDSIDLFFDACEISDGSNGMHHVKAPLSETTSGNLNNRNGDAMKSMPTKCQTSKSSTSEGVAGPDSPSYFDDMIDSNSEVAASVAALRKAIEEARVRMKVAEELMRRKKEGFPYCVKRKSNIELKAEGKKEAKVTYKTMKLEEINTKQTFGEMDALPNASSEVGKSKMRIGQVRSDVGAKEMCVTKEAVREAQKKLKSTQVKHKKEVEQKEADHKGKNFELKEAENNKKELHIKSTDRNAPDKPEASDHTIEMVKEYWWPENNVEKVHADNEASACEDLVQETKHRCQEVVDETKLIQETLENGTIDKSLKANGNGKVENKVTPFHEPEDYESNLGGLGLITGNGKNVACKPEDGNKFEGSFELEECKINLSAVQELGEVEKNITQEQKGSEDRVSVSSELEEYELTEILEPLNNESVCSQHGSDLISMDKEIDNLGCLEDRNKRNESGFLDINQENEHSCQREATDNMFSNIYVQEILEDIVDHIHNEEEIYERNTKESNLDGNGMVLDAQAIENEFEGATHLIG 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0131 840 MobiDBLite consensus disorder prediction 289 311 - -
Ssu5g0131 840 PANTHER AUXILIN-LIKE PROTEIN 677 806 - -
Ssu5g0131 840 PANTHER AUXILIN-LIKE PROTEIN 65 709 - -
Ssu5g0131 840 MobiDBLite consensus disorder prediction 518 561 - -
Ssu5g0131 840 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 65 709 - -
Ssu5g0131 840 Coils Coil 503 541 - -
Ssu5g0131 840 MobiDBLite consensus disorder prediction 341 378 - -
Ssu5g0131 840 Coils Coil 398 425 - -
Ssu5g0131 840 MobiDBLite consensus disorder prediction 341 377 - -
Ssu5g0131 840 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 677 806 - -
Ssu5g0131 840 Coils Coil 38 58 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0131 - - vun:114193149 1033.09