Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0047 ATGTCTCGTTGCTTCCCTTTCCCCCGTTCAGGGTATGGGGCACGTGACGAGGCCTTGATCGAATCGATTAAGCTCCGAAAGGAGATTGAGAAGGCCAAGAAAGACCggaaggagaagaaagagaagaagagggagaagaaggagaaaaggaaagagaagaaagaaagcaaaCATAAAGAAGGAACAACAACCTCTCATGGCAGTGATGATGGCAAAAAGTTAAAGCTCATTAGCGAAATAAAGGAATCCAAAGCAGATGGAAGGTTGCAAAAGGGTGAAGACTGTGAGAATGAACAACATGAGAGGAGTGGAATTACAGAGGAACTTGACCAACCTGTCACTTCCCTGGAGCCTTGCTGCTTGTCTGACAGTACTCAAAGCAGCAAGAGGAAAAGGAGCTCCCCACAAGCAAGTCATGATCATGGACCTGCTATTAAAATTCGTCTGCCTTTGAGGAAACATAGAGATCCTGAAGAATTGAAATCCAAACCACAATTTCAAGTGGGGTCTTCTTCTGGAAGTGTGGGAGTTGCAGATTCCTTAACTAAAAATACCCTTGGGAATGGTTATCGTCAGTTGCAATGTCCCACGAATACAGAGCCCAAACAGGTTCTTGGAAACTCTGATTCTAGACATTGCAAAGTGGTGCAGAATTTAGTTCATGGAGATGCTGTGGTCACTAAAAAAACCCTTGGAAGTGACCGTCAGTTACAATATCTTGCGAAGTCTGAGCCCAAACGGGTTCTTGGAAACTCTGATTCTAGACATGGCAAAGCTGTGCAGAATTTAGTTCATGGAGACGCTGTGGTCAGTAAAAATACCCTTGGAAGTGATCGTCAGTCACAATATCTCCCGAAGACTGAGCCCAAACGGGTTCTTGGAAACGCTGATTATAGACATTGCAAAGCTGTGCAGAATATAGTTCATGGAGGTGCTGTGGTCACTAAAAATACCCTTGGAAGTGATCGTCAGTTGCTGCAATGTTTCACGAATACAGAGACCAAACGTGTTCTTGGAAACTCTGATTCTAGACATGGCAAAGCAATGCAGAATTTGGTTCCTGGAGATGTGTTCACTAATAATGCAGTTGCTGATGAAAGTCAAAAGGTGGCATCTTTGTACAAGTCTTTGTTACAGATTCCTCCTCTAACGTATGATGGATTGGACTCAGTAGATCAAGATTGGTTATTTAGTTCGGAACCGAGAGAGGCAAGGCCCGGGTCAAAGAAACAGAAGACTGATTCTGATATGTTCCAGCTTTCAAAGTCTGTGTGGCCTCGTGCTCAATACTTGCCTGAGGTCGAAGTATATGCGTTGCCATACGCAGTTCCATTTTGA 1338 0.4208 MSRCFPFPRSGYGARDEALIESIKLRKEIEKAKKDRKEKKEKKREKKEKRKEKKESKHKEGTTTSHGSDDGKKLKLISEIKESKADGRLQKGEDCENEQHERSGITEELDQPVTSLEPCCLSDSTQSSKRKRSSPQASHDHGPAIKIRLPLRKHRDPEELKSKPQFQVGSSSGSVGVADSLTKNTLGNGYRQLQCPTNTEPKQVLGNSDSRHCKVVQNLVHGDAVVTKKTLGSDRQLQYLAKSEPKRVLGNSDSRHGKAVQNLVHGDAVVSKNTLGSDRQSQYLPKTEPKRVLGNADYRHCKAVQNIVHGGAVVTKNTLGSDRQLLQCFTNTETKRVLGNSDSRHGKAMQNLVPGDVFTNNAVADESQKVASLYKSLLQIPPLTYDGLDSVDQDWLFSSEPREARPGSKKQKTDSDMFQLSKSVWPRAQYLPEVEVYALPYAVPF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0047 445 MobiDBLite consensus disorder prediction 54 107 - -
Ssu5g0047 445 MobiDBLite consensus disorder prediction 164 206 - -
Ssu5g0047 445 PANTHER MYB-LIKE PROTEIN X 1 445 - -
Ssu5g0047 445 MobiDBLite consensus disorder prediction 145 162 - -
Ssu5g0047 445 PANTHER DNA LIGASE 1 445 - -
Ssu5g0047 445 Coils Coil 15 59 - -
Ssu5g0047 445 MobiDBLite consensus disorder prediction 37 53 - -
Ssu5g0047 445 MobiDBLite consensus disorder prediction 117 132 - -
Ssu5g0047 445 MobiDBLite consensus disorder prediction 29 206 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0047 - - gmx:100777835 497.278