Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0045 ATGGTTCATCTAACTAagcttctttcttcttcttcttgctctcGCTTTCCTCCTTCCCACGTGCTTCGTTTcacattactattattatttgtttgctgCAAAACAAAGGCTTTGCTGAAACTACCACCAAATGTTTCGGTTCCTGCAGTTTTTGTGTTTGGAGATTCGGTGGTGGATAcaggcaacaacaacaacagaacAACATTTGCTCGCTCTAATTTCCCACCCTATGGGAGGGACTTTGAGGGAGGCATCCCAACTGGCCGGTTTAGTAATGGAAAGGTTCCATCAGACTTTATAGTTGAAGAGTTGGGCATTAAGGAGTTTCTGCCAGCGTGTTTGAAATCCAATCTCCAATCCAGTGATTTGGTCACAGGGGTCTGTTTTGCTTCAGGTGGCTCAGGGTACGATCCTTTGACATCCATATTAGAGTCATCTATGCCAATAACTGGCCAACTGAGCTTGTTCAAAGAATACATAAGAAAGCTAAAAGGACTGGTTGGAGAGGACAGAGCAAACTTCATCTTAGCCAACAGTCTTTTTATTGTAGTAGCAGGCAGCAGTGACATTTCTAATACGTATCGCGCTAGATCTCTACTGTATGGTCTTCCAGCTTACAGTGACCTTTTGGTCAACTCAGCCTCTAATTTCTTAACGgaaataaatgaGCTAGGTGCACGGAGGATTGCAGTATTCAGTGCACCCCCAATTGGGTGTTTGCCTTTTCAGAGAACAGTGGGCGGAGGAATAGCAAAAAGGTGTGCAGAAAGGCCCAACAACTTGGCCCAGTTATTTAACAGCAAATTGTCGAAGGAGCTGGATTCCCTTAACAGGAACTTTCCCCATAGCAGGAATGTTTTCATAGATGTTTACAGCCCTCTGCTTGACATCATCGTCAACTACCAAAAATATGGCTATAAAGTTGGGGACACAGGATGCTGCGGCACAGGCAGAATAGAGGTTGCGATATTATGCAACCGTTTCGATTCCACCTGTCCCAATGTCCAAGATTATGTCTTTTGGGACAGTTTTCATCCTACAGAAAGCGTTTACAAAAAGCTCATAGCTCCTATTCTTCAAAAATATCTGTACCATTTCAAGTGA 1104 0.4058 MVHLTKLLSSSSCSRFPPSHVLRFTLLLLFVCCKTKALLKLPPNVSVPAVFVFGDSVVDTGNNNNRTTFARSNFPPYGRDFEGGIPTGRFSNGKVPSDFIVEELGIKEFLPACLKSNLQSSDLVTGVCFASGGSGYDPLTSILESSMPITGQLSLFKEYIRKLKGLVGEDRANFILANSLFIVVAGSSDISNTYRARSLLYGLPAYSDLLVNSASNFLTEINELGARRIAVFSAPPIGCLPFQRTVGGGIAKRCAERPNNLAQLFNSKLSKELDSLNRNFPHSRNVFIDVYSPLLDIIVNYQKYGYKVGDTGCCGTGRIEVAILCNRFDSTCPNVQDYVFWDSFHPTESVYKKLIAPILQKYLYHFK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0045 367 CDD SGNH_plant_lipase_like 48 362 IPR035669 -
Ssu5g0045 367 Gene3D SGNH hydrolase 41 362 IPR036514 -
Ssu5g0045 367 PANTHER GDSL ESTERASE/LIPASE EXL3 26 363 - -
Ssu5g0045 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 26 363 - -
Ssu5g0045 367 Pfam GDSL-like Lipase/Acylhydrolase 50 355 IPR001087 GO:0016788
Ssu5g0045 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 50 61 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0045 Ssu-Chr5 796733 804910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0045 44 360 Pollen Coat Proteome AT1G75910 40.122 1.02e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0045 - - gmx:102667991 637.491