Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0035 ATGGATCGGTACCAGAAGGTGGAGAAGCCAAGAGCTGAAACTCCAATCGATGAAAACGAGATCCGGATTACTAGTCAGGGGAGGATGCGCAACTACATTACTTACGCCATGAGCTTGCTTcagGAAAAAGGTTCTAATGAAATTGTTTTCAAAGCAATGGGGAGAGCTATCAACAAAACTGTAACGATTGTGGAGTTGATCAAGAGGAGAATTGTGGGCCTCCACCAGAATACAGCAATTGGATCCACTGATATCACTGATACTTGGGAGCCCCTAGAGGAAGGCCTCCTTCCTTTGGAGACAACGAGGCATGTGTCAATGATAACAATAACCCTTTCAAAGAAGGAACTTGATACATCATCTGTGGGGTATCAGACTCCATTACCAGCTGACCAGGTGAAGGCTGTTACAGATTTTGATTATGAAGGAGATGGTTCACCTAATGGCCGTGTTCGAGGTCGTGGTGGCCGAGGCAGGGGAAGGGGCAGAGGGAATGGTTTTATTTCAGCTGATTACGAGGATGGAGGTTGGGATCGTAATAGGGGAAATGCTAGGGGCAGGGGTAGAGGAAGAGGACGTGGCTTTCGTGGTCGTGGAAGGGGAGGGTACAATGGGCCCCATGTTGATATGCAGCAAGATGGAGGATACAATCAAGATGTTCCTCAAGGCCGTGGTACTTACTTAATCCCTATTACTTGCTTTCATTTCTGTGGTAGATACATGTGTGCATTGGCTACCAGTGTTAGGCAATCAGCTTTTGCAGTTGAGATTCTGGAAGTGTTTGAGCCGGTTGTGTAA 798 0.4674 MDRYQKVEKPRAETPIDENEIRITSQGRMRNYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTSSVGYQTPLPADQVKAVTDFDYEGDGSPNGRVRGRGGRGRGRGRGNGFISADYEDGGWDRNRGNARGRGRGRGRGFRGRGRGGYNGPHVDMQQDGGYNQDVPQGRGTYLIPITCFHFCGRYMCALATSVRQSAFAVEILEVFEPVV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0035 265 PANTHER RIBONUCLEASE P SUBUNIT P25 1 225 - -
Ssu5g0035 265 MobiDBLite consensus disorder prediction 139 214 - -
Ssu5g0035 265 Gene3D - 14 118 IPR036882 GO:0003676
Ssu5g0035 265 PANTHER ALBA DNA/RNA-BINDING PROTEIN 1 225 - -
Ssu5g0035 265 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Ssu5g0035 265 Pfam Alba 19 83 IPR002775 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0035 Ssu-Chr5 590199 593424 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0035 - - gmx:100818986 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0035 5 590199 593424 Ssu5g0035 5 590199 593424 ECH