Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0028 ATGATGGAGAAAGAGAAACAGTCTAAGCTGAGGAGCAAGATCTTGAAGATACTGCCAAAAGCGGCTGCAGCAGTGACTTTCCAAAACCTTCCGTTCAGCCCAGGGAGGGATCACAAATTCAAACACTCTGGCGGCAAGGGCTTCTTCTCTGGCCCTATGATTCCTGATGAAGCTAGAAGAAAGCCAAAGGATGGGGGCGTTGAAACTCAGGAACCCACTTCGCCCAAAATCTCCTGCATGGGACAGATCAAGCACAAGAAGAAGCACGTTAAAAAAGGAGGGGCCAAGAGCATGTCCATGCCTACACGCGCCATAGACAGCGCGTCTTCCACTCCCAGAGACACGGAGGAAAAGAAGCAGAAGCAGAAGCACGCTTCCAAGTTTCAGAAGATGTTGTTCCACGCGGGGAAACCTAAAACCGTGTCGAGCAAAAAATCTGATGCGGTTGCGGACACGGCACCGCCGTTGGGTCACATGAGGCGATTTGCAAGTGGGCGCGAAACTTTTTCCAATTTCGATTGGAAGGCTCAGATAGCGCCAGAGGAGAGGGATTGCTATTCGGATTGTGATGATAGAGTGGAGAGCGATGCAGAGGATGAGGTCATAATACCTTTCTCTGCTCCTATTATGGTAGGTGGTGGTGCAGCGAGTGTGCCTAATTTGCAGCCACGGAAAGAGATTAATCTTTGGAAGAGAAGAACCATGGGGCCGCCTAGGCCTCTTCAATTGAATCCAGTGCTTACAGCCAAATGA 753 0.502 MMEKEKQSKLRSKILKILPKAAAAVTFQNLPFSPGRDHKFKHSGGKGFFSGPMIPDEARRKPKDGGVETQEPTSPKISCMGQIKHKKKHVKKGGAKSMSMPTRAIDSASSTPRDTEEKKQKQKHASKFQKMLFHAGKPKTVSSKKSDAVADTAPPLGHMRRFASGRETFSNFDWKAQIAPEERDCYSDCDDRVESDAEDEVIIPFSAPIMVGGGAASVPNLQPRKEINLWKRRTMGPPRPLQLNPVLTAK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0028 250 PANTHER OS09G0542900 PROTEIN 2 244 - -
Ssu5g0028 250 MobiDBLite consensus disorder prediction 31 157 - -
Ssu5g0028 250 PANTHER OS09G0542900 PROTEIN 2 244 IPR038796 -
Ssu5g0028 250 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0028 Ssu-Chr5 465485 466237 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0028 - - gmx:100815089 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0028 5 465485 466237 Ssu5g0028 5 465485 466237 ECH
Ssu5g0028 5 465485 466237 Ssu1g4011 1 99029876 99030649 PCT