Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0027 ATGATCTCTACACGCATGGCTACCAtcaccaacaatttcatattcaaacCCCCCATCTTCCACTCCGCACCCCGAAAGCTCCTTCCCCATCGCTCTTCTCTACCTTTTCTCAGTAAAGGAATCGGAGGCAATTGTCGTTCTCATCAGCGGATACGGCTTATCCCGAAAGCCACAGCGGCTTCGGGCGCGAAGAAACAAGAAAAGCGCGAAAGAGTTCAGCGAGTCCACAGCGTGGAGGAGTTCGACTCGGCGCTTCAGTCGGCGAAAGAGAGACTGGTGGTGGTGGAATACGCGGCGAGCGACAGCGAGGAGAGCAGCCAAATCTACCCTTTCATGGTGGAGCTGAGCCGCAGCTGCAGCGACGTGGAATTCATTCTCGTAATGGGCGACGAGTCGGAGAAGACAAAGGAGCTGCTGAAGCGAGAGAAAGTGGAGAAAGTGCCTCACTTCAGCTTCTACAAGAGCAAGGAGAAGATCCACGAAGAGGAAGGCATCGGCCCAGACATGttggttggggacgtgctatactACGGGGACAACCATTCGGCGGTCGTGCAGCTGCACAGCGGGGAGGACGTGCAGAAGCTGATAGAGGACCACAAGGTGGATCACAAGCTCATTGTGCTGGATGTTGGGCTCAAGCATTGCGGGCCCTGCGTTAAGGTTTATCCGACGGTCATTAAGCTGTCCAGGCAAATGGACTCGGTGGTGTTCGCGCGGATGAATGGGGACGAGAATGACAGCTGCATGCAGTTCTTGAGGGACATGGAAGTCGTGCAGGTCCCTACCTTTCTCTTCATCAGAGATGGCAACATTGAGGGCAGGTACGTCGGTTCTGGGAAAGGGGAGCTCATTGGGGAAATTCTCAGGTACCAAGGGGTGCGCGTCACTTAA 894 0.5246 MISTRMATITNNFIFKPPIFHSAPRKLLPHRSSLPFLSKGIGGNCRSHQRIRLIPKATAASGAKKQEKRERVQRVHSVEEFDSALQSAKERLVVVEYAASDSEESSQIYPFMVELSRSCSDVEFILVMGDESEKTKELLKREKVEKVPHFSFYKSKEKIHEEEGIGPDMLVGDVLYYGDNHSAVVQLHSGEDVQKLIEDHKVDHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMDSVVFARMNGDENDSCMQFLRDMEVVQVPTFLFIRDGNIEGRYVGSGKGELIGEILRYQGVRVT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0027 297 Gene3D Glutaredoxin 59 176 - -
Ssu5g0027 297 SUPERFAMILY Thioredoxin-like 178 285 IPR036249 -
Ssu5g0027 297 Pfam Thioredoxin 75 165 IPR013766 -
Ssu5g0027 297 Pfam Thioredoxin 199 283 IPR013766 -
Ssu5g0027 297 Gene3D Glutaredoxin 177 292 - -
Ssu5g0027 297 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 44 297 IPR044192 GO:0016671
Ssu5g0027 297 SUPERFAMILY Thioredoxin-like 67 167 IPR036249 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0027 - - gmx:100814030 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0027 5 454514 455407 Ssu5g0027 5 454514 455407 ECH