Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0026 ATGGCGACGGGAACGGTGAAGGTGTACGGGCCACCCATGTCAACCGCTGTGTCCAGGGTCTTGGCCTGTCTCCACGAGAAAGACATCCCATTCCAACTCATTCCTATTAACATGTCCAAAGGGGAACATAAGAAGCCCGACTTCCTCAAGATTCAGCCCTTTGGCCAAGTACCAGCATTTCAGGATGAGGACATTTCCCTCTTCGagtctCGAGCGATATGCCGGTACGTTTGTGAGAAATACGGGGAGAAAGGGAACAGGGAACTGTACGGAACGAACCCGTTGGCAAAGGCGTCCATAGATCAATGGTTGGAGGCTGAAGGGCAGAGCTTCAACCCGCCTTCCTCCACTCTGGTGTTCCAGCTGGCATTTGCTCCCCGAATGAAGATCAAGCAAGACGAGGGTGCCATCAAGCAGAGCCAAGAAAAACTCGCCAAAGTGCTTCATGTGTACGATAAGAGGCTTGGGGAGAGTCGTTTCTTAGCAGGGGATGAGTTCTCTCTCGCTGATCTTTCCCATCTTCCCAACACTCACTACTTGGTCGCTGCCACCGACGCTGCTCCTCTCTTCACTTCTTCTCCCAACGTCTCCAGGTGGTGGAACGAGATCTCCTCTCGTCCCTCCTGGGAAAAAGTCGTTGAATTGCAGCGAACTGCTTGA 660 0.5242 MATGTVKVYGPPMSTAVSRVLACLHEKDIPFQLIPINMSKGEHKKPDFLKIQPFGQVPAFQDEDISLFESRAICRYVCEKYGEKGNRELYGTNPLAKASIDQWLEAEGQSFNPPSSTLVFQLAFAPRMKIKQDEGAIKQSQEKLAKVLHVYDKRLGESRFLAGDEFSLADLSHLPNTHYLVAATDAAPLFTSSPNVSRWWNEISSRPSWEKVVELQRTA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0026 219 SUPERFAMILY Thioredoxin-like 5 85 IPR036249 -
Ssu5g0026 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Ssu5g0026 219 SUPERFAMILY GST C-terminal domain-like 86 214 IPR036282 -
Ssu5g0026 219 CDD GST_N_Phi 5 80 - -
Ssu5g0026 219 Pfam Glutathione S-transferase, C-terminal domain 117 207 IPR004046 -
Ssu5g0026 219 Gene3D Glutaredoxin 4 91 - -
Ssu5g0026 219 CDD GST_C_Phi 95 213 IPR034347 -
Ssu5g0026 219 Gene3D - 92 213 - -
Ssu5g0026 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 219 IPR010987 -
Ssu5g0026 219 SFLD Glutathione Transferase (cytosolic) 5 216 IPR040079 -
Ssu5g0026 219 SFLD Main.5: Phi-like 5 216 - -
Ssu5g0026 219 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Ssu5g0026 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 6 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0026 Ssu-Chr5 438770 439601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0026 8 217 Glutathione S-transferase Gene Family AT2G47730 49.524 2.32e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0026 K00799 - rcu:8267851 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0026 5 438770 439601 Ssu5g0026 5 438770 439601 ECH