Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0018 ATGAGGCATAATAAGGTAGCAGATAAAGGTCACTTTGTGGTGTACACCATTGACAAGGGACGTTTCGTGGTACCATTGACTTATTTGAGGAACAACATATTCAGAGAGCTGTTCAGGATGTCTGAGGAACACTTCGGACTCCCAACTGACGGTCCAATAATATTACCCTGTGATGCACCCTTCATGGAATATGTTGTGTCGTTGATTCGGAAACACGCATCTTTGGAGCTTGAGAACGCAGTGCAGCTAGTAGCATCTTTTGGCTTTGGATCTATTTGCCACTGTCTCCCACCTGTATCTGCAGCTCAGGATCTTGCTGTTGTCTAA 327 0.4495 MRHNKVADKGHFVVYTIDKGRFVVPLTYLRNNIFRELFRMSEEHFGLPTDGPIILPCDAPFMEYVVSLIRKHASLELENAVQLVASFGFGSICHCLPPVSAAQDLAVV 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0018 108 Pfam Auxin responsive protein 3 69 IPR003676 GO:0009733
Ssu5g0018 108 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR66-LIKE 3 86 - -
Ssu5g0018 108 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0018 Ssu-Chr5 241675 242001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0018 10 105 Calmodulin-binding Proteins AT4G34750 27.835 8.33e-08 45.8