Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3581 ATGGCCATGTTGCTTGCTCTTGTCATTCTGTGCATATATTTGTTTCGCAGTACAACTCCTCAACAGGAAGCTTCTGGCCTGGGAAGGTCAACTTCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCGGGTATTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGATCTGCAAGAGAGGCATTGcagGTAGCTACTCGTGCAGGTGGTTTATCTGCTATCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTATATGCCACATTTTATGTTTGGTTGGGAGTGGACTCACCTGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTATTTGCTCAGTTGGGTGGTGGAATATATACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCCGTTATTGCTGATCTggTTGGTGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCAATGATACTTGGTGGAACAATGGCACAACGCTGTAAAATTGCAGATCCATCTGGCTTCATCTTATTTCCTCTTGTTGTTCACTCATTCGATCTGGTAGTTTCATCAGCTGGAATATTTTCTATTAGGGGTACACGTGAAACTGGAGTAATAGTTCCTATGGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTTTTACCATAGTTTTAGCTGTTCTGGCATTTGGTTTGTCTACCCGGTGGTTACTTTACACTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACTGCTTATATTTTTGTCTGGATTGCCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCATATTAGCCCTTTCCAGCTCTACTGGCCATGGTACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCCGTCCTTGTCATCAGTGTGTCAATTGTCTCAGCTTTCTGGCTGGGCCACACCTCCGGACTAGTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTGGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACTATGGATATGTTTGGCCCAATAGCTGATAATGCTGGCGGAATTGTAGAAATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATAACTGATGTCCTTGATGCCGTAGGAAACACAACCAAAGCTACCACCAAAGGATTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTCTTGTTTAGTGCTTATATGGATGAAGTTTCTACATTTGCTCGTGAACCTTTTAAACAGGTTGATATTGCAATTCCCGAAGTTTTCATTGGTGGGTTGCTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTTGGCAGAACTGCACAAGAGGTTGTTAATGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCGTTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAGTTGGTTTACTGTTCCGAATTTTGGGCTACTATACAGGGCATCCTTTACTCGGGGCTAAAGTTGTGGCTGCTTTCCTCATGTTTGCAACAGTGTCTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCCATAACTGGAGATACAGTGGGAGACCCGTTCAAAGACACAGCTGGGCCTTCACTCCATGTCCTTATAAAGATGCTCGCAACGATTACACTGGTAATGGCTCCAGTCTTCCTGTGA 2040 0.4407 MAMLLALVILCIYLFRSTTPQQEASGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIADPSGFILFPLVVHSFDLVVSSAGIFSIRGTRETGVIVPMEDPMTILQKGYSFTIVLAVLAFGLSTRWLLYTEQAPSAWFNFALCGLVGIITAYIFVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLVDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAREPFKQVDIAIPEVFIGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGLLFRILGYYTGHPLLGAKVVAAFLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3581 679 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 22 678 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3581 679 PIRSF H+-PPtase 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3581 679 Pfam Inorganic H+ pyrophosphatase 5 674 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3581 679 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3581 679 PANTHER INORGANIC DIPHOSPHATASE-RELATED 1 679 - -
Ssu4g3581 679 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3581 Ssu-Chr4 86865636 86873154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3581 1 679 Primary Pumps ATPases AT1G16780 89.838 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3581 K23025 - gmx:100787805 1241.1