LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu4g3530	ATGGAGAACCAGAGAACTATCCTTCAAGTAGTGCAGACACAGCCCTTTGCCGCCTCCGCCGTGCTGGGTGGTTTGTCTCTGCTCTTTTTGCCCTTCCTCAGGCTTAGGGAGGACAAACATTCTAGACTTTCCTCAGTACCAGCGGTTCCGGGGCTACCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACCTTCACACAGTTAGCTGAGGAATATGGGCCCATTTATTCCATCAGAACGGGTGCTTTCACCGTCATTGTTCTCAACTCCGTACACGTTGCCAAGGAGGTTAGCAATGGTGACAAGATTTTCAACCATGTCAATAGGCAGCTATCAACTGCACTCAAGATTTTGACTTTGGATAAATGCATGGTTGCTATAAGCGACTACAATGATTttcacaaaatgatcaaaaagcATATTCTTTCAAACGTTCTTGGAGCCAACGCACAGAAGCGACACTGTTCCCACAGAGAAGTCATGATTGAAAATCTTTCAAGGCAGTGTGAAGAGCTCCTCTACTTCAGCTGCGTGGGAACCAATGTAGAATCCATTTATGTGGCGGAGCTGGGTGATACTTTGTCAAAAGATGACAAATATAAGATTCTAGTGCTTGACCTGATGCAAGGTGCATTTGAGGTGGATTGGCGAGATTCCTTTCCATACTTGAAATGGATTCCAAACAAGAGTCTAGAGATGAAATTGCACTTCCTCAGGAAAGCTGTGATGGAGGCTTTGATTGATGAGCAGAAGAAGCGAATTGCTTCAGGAAAGGCAATGTTGATAGCTTGCACAGCAATTGGTAGATTGGTTCAGGAATTCGAGTGGAAGCTCAAAGAAGGAGCGGGAGGAGAGGATGTGGATACGGTGGGCCTTACCACCCACAAGCTTCATCCCCTGCAAGTGAAACTCAAGCCAAGAAATCATTAG	945	0.4487	MENQRTILQVVQTQPFAASAVLGGLSLLFLPFLRLREDKHSRLSSVPAVPGLPVIGNLLQLKEKKPYKTFTQLAEEYGPIYSIRTGAFTVIVLNSVHVAKEVSNGDKIFNHVNRQLSTALKILTLDKCMVAISDYNDFHKMIKKHILSNVLGANAQKRHCSHREVMIENLSRQCEELLYFSCVGTNVESIYVAELGDTLSKDDKYKILVLDLMQGAFEVDWRDSFPYLKWIPNKSLEMKLHFLRKAVMEALIDEQKKRIASGKAMLIACTAIGRLVQEFEWKLKEGAGGEDVDTVGLTTHKLHPLQVKLKPRNH	314

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu4g3530	314	Pfam	Cytochrome P450	48	265	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ssu4g3530	314	PANTHER	ENT-KAURENE OXIDASE, CHLOROPLASTIC	14	177	IPR044225	GO:0005506\|GO:0009686\|GO:0010241\|GO:0020037\|GO:0052615
	Ssu4g3530	314	PANTHER	ENT-KAURENE OXIDASE, CHLOROPLASTIC	263	313	IPR044225	GO:0005506\|GO:0009686\|GO:0010241\|GO:0020037\|GO:0052615
	Ssu4g3530	314	PANTHER	ENT-KAURENE OXIDASE, CHLOROPLASTIC	182	264	IPR044225	GO:0005506\|GO:0009686\|GO:0010241\|GO:0020037\|GO:0052615
	Ssu4g3530	314	Gene3D	Cytochrome P450	35	266	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ssu4g3530	314	SUPERFAMILY	Cytochrome P450	42	262	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu4g3530	Ssu-Chr4	86301788	86305070	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu4g3530	257	312	Cytochrome P450	AT5G25900	56.897	3.90e-12	64.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu4g3530	K04122		-	gmx:100802970	280.411

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