Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3530 ATGGAGAACCAGAGAACTATCCTTCAAGTAGTGCAGACACAGCCCTTTGCCGCCTCCGCCGTGCTGGGTGGTTTGTCTCTGCTCTTTTTGCCCTTCCTCAGGCTTAGGGAGGACAAACATTCTAGACTTTCCTCAGTACCAGCGGTTCCGGGGCTACCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACCTTCACACAGTTAGCTGAGGAATATGGGCCCATTTATTCCATCAGAACGGGTGCTTTCACCGTCATTGTTCTCAACTCCGTACACGTTGCCAAGGAGGTTAGCAATGGTGACAAGATTTTCAACCATGTCAATAGGCAGCTATCAACTGCACTCAAGATTTTGACTTTGGATAAATGCATGGTTGCTATAAGCGACTACAATGATTttcacaaaatgatcaaaaagcATATTCTTTCAAACGTTCTTGGAGCCAACGCACAGAAGCGACACTGTTCCCACAGAGAAGTCATGATTGAAAATCTTTCAAGGCAGTGTGAAGAGCTCCTCTACTTCAGCTGCGTGGGAACCAATGTAGAATCCATTTATGTGGCGGAGCTGGGTGATACTTTGTCAAAAGATGACAAATATAAGATTCTAGTGCTTGACCTGATGCAAGGTGCATTTGAGGTGGATTGGCGAGATTCCTTTCCATACTTGAAATGGATTCCAAACAAGAGTCTAGAGATGAAATTGCACTTCCTCAGGAAAGCTGTGATGGAGGCTTTGATTGATGAGCAGAAGAAGCGAATTGCTTCAGGAAAGGCAATGTTGATAGCTTGCACAGCAATTGGTAGATTGGTTCAGGAATTCGAGTGGAAGCTCAAAGAAGGAGCGGGAGGAGAGGATGTGGATACGGTGGGCCTTACCACCCACAAGCTTCATCCCCTGCAAGTGAAACTCAAGCCAAGAAATCATTAG 945 0.4487 MENQRTILQVVQTQPFAASAVLGGLSLLFLPFLRLREDKHSRLSSVPAVPGLPVIGNLLQLKEKKPYKTFTQLAEEYGPIYSIRTGAFTVIVLNSVHVAKEVSNGDKIFNHVNRQLSTALKILTLDKCMVAISDYNDFHKMIKKHILSNVLGANAQKRHCSHREVMIENLSRQCEELLYFSCVGTNVESIYVAELGDTLSKDDKYKILVLDLMQGAFEVDWRDSFPYLKWIPNKSLEMKLHFLRKAVMEALIDEQKKRIASGKAMLIACTAIGRLVQEFEWKLKEGAGGEDVDTVGLTTHKLHPLQVKLKPRNH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3530 314 Pfam Cytochrome P450 48 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3530 314 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 14 177 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Ssu4g3530 314 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 263 313 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Ssu4g3530 314 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 182 264 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Ssu4g3530 314 Gene3D Cytochrome P450 35 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3530 314 SUPERFAMILY Cytochrome P450 42 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3530 Ssu-Chr4 86301788 86305070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3530 257 312 Cytochrome P450 AT5G25900 56.897 3.90e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3530 K04122 - gmx:100802970 280.411