Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3519 ATGGCAGCCTCATGGCAGCTCACATGCGCCCTCTTGCTACTCATCTCCGTCGTTGTCACCGCCACGGACCACATTGTGGGTGCCAATCGTGGCTGGAACGCTGGCATTAATTACACTCTTTGGGCCAACAACCACACTTTCTATGTTGGCGACCTTATCTCATTCAGGTACCAAAAAAACCAATACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACCACAGAAGGGGCAGTGGGGAATTGGAGTAGTGGCAAGGATTTCATACCCCTAAATGAGGCCAAGAGATATTACTTCATTTGTGGCAATGGACAATGCTTCAGTGGGATGAAGGTCTCTGTTCTTGTCCATCCTCTTCCTTCTCCTCCTACCTCTCCAATTTCTGCTGAACATTCAACACCAAAGTCTGCTTCTACTGTGGTCTTCAAACGGGGACTGCGCCCTCTAGTGGTGTGTTATTTTTTAGCTTGGTTTGGATTTGTTTGGATGTAG 498 0.4759 MAASWQLTCALLLLISVVVTATDHIVGANRGWNAGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNEAKRYYFICGNGQCFSGMKVSVLVHPLPSPPTSPISAEHSTPKSASTVVFKRGLRPLVVCYFLAWFGFVWM 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3519 165 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Ssu4g3519 165 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Ssu4g3519 165 Gene3D - 20 121 IPR008972 -
Ssu4g3519 165 PANTHER BLUE COPPER PROTEIN 10 152 IPR039391 GO:0009055
Ssu4g3519 165 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Ssu4g3519 165 CDD Phytocyanin_like_1 22 118 - -
Ssu4g3519 165 PANTHER OS09G0557900 PROTEIN 10 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3519 Ssu-Chr4 86188599 86189508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3519 19 127 Phytocyanin Superfamily AT5G15350 45.946 2.35e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3519 - - gmx:100305555 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3519 4 86188599 86189508 Ssu4g3519 4 86188599 86189508 ECH