Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3503 ATGTCTCTAAAGATAGCAGCCGAAATTGATCTAAAATCACCATCAGAGACAGTGGAGGAGCCATCGGTGGTGGTAAGGGAATATGATGAAGATAGACACAAGGAGGCAGTAGAGAAACTTGAGAGGATTTGTGAAGTTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGCGACCCCATATGCCGTATTCGTCACTTTCAATTGCATGTCATGCTGGTTGCAGAATATGgagaagaaggagaagttgttgGGGTGATAAGGGGGTGTGTAAAAACAGTTACAAGAGGGAATTCGATTTATGTAAAACTGGCCTATGTTTTGGGGCTCAGAGTCTCCCCCCGACACAGGAGATTTGGCATTGGCACAAAACTAGTTGAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGGCTAAGTATGCATATATGGCAACTGATTGTACAAATGAGCCCTCCTTGAATTTGTTCACAAAAAAATGTGGGTACTCAAAGTTCAGGAGTCTAACCATACTAGTACAACCAGTGCATGCACACTACAAGCCAATTAGCCCTAGCGTTGCTGTGCTTCACCTTCCACCACGCCTAGCCGGGTCCATGTATAGCCACATGTTTGCCAACTCAGAATTTTACCCTAAAGACATAGAGTTAATTTTGTCAAACAAGCTGAATTTGGGCACTTTCATGGCCATCCCCAAGAAGTACCTGTCCAAATGTGATCCAAAAAGGGGCATTCTCCCTCCAAGCTATGCAATATTAAGTGTGTGGAACACCAAAGATGTGTTCAAATTGCAAGTGAAGGGTGTGTCACCATTGGCACATGCTTGCTGCGTAGGTACAAGGTTGTTGGATGAGTGGATGCCATGGCTAAGGCTACCTTCCTTTCCTGATGTTTTTAGACCATTTGGGGTTTATTTTCTGTATGGACTACACATGGAAGGAAAGTGTGGCACGCAGCTTATAAAGAGCCTATGCGGATTCGTGCATAACATGGCAAGAGATGATGGTGGCTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTTAGAGACGCAGTCCCACATTGGAGCAAGTTCTCATGGACAGAGGACATGTGGTGCATTAAGAATCTTGAGGACACTAAGCAGAATATCCCCGAAAAATGTGGGCCATCGGATTGGTTCACTTCTAGATCCTCTTCGCCAGTAATATTTGTTGATCCTCGCGATTTTTGA 1224 0.4461 MSLKIAAEIDLKSPSETVEEPSVVVREYDEDRHKEAVEKLERICEVGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEEGEVVGVIRGCVKTVTRGNSIYVKLAYVLGLRVSPRHRRFGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEPSLNLFTKKCGYSKFRSLTILVQPVHAHYKPISPSVAVLHLPPRLAGSMYSHMFANSEFYPKDIELILSNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFLYGLHMEGKCGTQLIKSLCGFVHNMARDDGGCGAIVAELGQRDPVRDAVPHWSKFSWTEDMWCIKNLEDTKQNIPEKCGPSDWFTSRSSSPVIFVDPRDF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3503 407 Gene3D - 20 169 - -
Ssu4g3503 407 CDD NAT_SF 74 144 - -
Ssu4g3503 407 PANTHER N-ACETYLTRANSFERASE 1 407 - -
Ssu4g3503 407 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016407
Ssu4g3503 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 197 IPR000182 GO:0016407
Ssu4g3503 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 167 IPR016181 -
Ssu4g3503 407 PANTHER OS12G0561600 PROTEIN 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3503 Ssu-Chr4 86064111 86066372 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu4g3503 Acetyltransf_1 2e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3503 - - gmx:100799977 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3503 4 86064111 86066372 Ssu4g3503 4 86064111 86066372 ECH