LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu4g3498	ATGCATGGTAAAAAACCAAAACGAAAGCAACTTAAGCCAATAATTGAAAGCCCATTCCCAacccaaaaaacaaaatcatttgaTCCAACACACGCACGCACACTCACACTCTCTCTCTTGATCATTCTCTCTGTTCTCGATCTCCAGCGGCAACTACCTTGTCTGACAGGTGAGTCCCCGGTCACaccttcaattcattttttctccATTCCGTTTTTTCCGAATTTCACCAATCCGATCGCAATTCTCATTCCGTCGCGAATTCGCACGCGTGTTTGTCGATCAGATCTTGTTTCCGGAGAAAGCAAAATGTCGGGGCAAACGCAGCGTCTGAACGTGGTCCCCACGGTGACGATGCTTGGGGTGGTGAAGGCGCGTCTGGTCGGCGCGACGCGGGGCCACGCGCTCCTGAAGAAGAAGAGCGACGCGCTGACGGTGCAGTTCCGCCAGATCCTGAAGAAGATCGTGTCGACGAAGGAATCCATGGGCGACATCATGAAAACCTCGTCGTTCGCCCTGACGGAGGCCAAGTACGTGGCCGGCGACAACATCAAGCACGTGGTCCTCGAGAACGTCCGCGAAGCCTCCCTCCGCGTCCGCTCCCGCCAGGAGAACGTCGCCGGCGTCAAGCTCCCCAAGTTCGAGTACACCGCCGACGGCGAGGTCACGAAGAACGACCTCACGGGACTGGCACGTGGTGGTCAGCAGGTGCAGCAGTGTCGCGCCGCGTACATCAAGGCCATCGAGGTGCTCGTCGAGCTCGCTTCGCTTCAGACATCGTTTCTCACTCTCGACGAGGCCATTAAGACCACGAATCGTAGGGTTAACGCGCTTGAGAATGTGGTGAAGCCGCGCTTGGAGAATACGATTAGTTACATCAAGGGGGAGTTGGATGAGCTCGAGAGGGAGGATTTCTTCAGGCTGAAGAAGATTCAGGGGTATAAGAAGAGGGAGATTGAGAAGCAGATGCAGATGCAGTTGTTGCAGTCCTCCAAGGTTGAGAGTAATCTCCCTTTGCGCAAAGGGGTTTCCCACAACTTGTTGTCTGTGGCCAATGACAAAGATGAGGATATCATTTTCTGA	1083	0.5245	MHGKKPKRKQLKPIIESPFPTQKTKSFDPTHARTLTLSLLIILSVLDLQRQLPCLTGESPVTPSIHFFSIPFFPNFTNPIAILIPSRIRTRVCRSDLVSGESKMSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLRVRSRQENVAGVKLPKFEYTADGEVTKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQMQLLQSSKVESNLPLRKGVSHNLLSVANDKDEDIIF	360

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu4g3498	360	PANTHER	V-TYPE PROTON ATPASE SUBUNIT D-RELATED	104	360	-	-
	Ssu4g3498	360	Pfam	ATP synthase subunit D	121	312	IPR002699	GO:0046961
	Ssu4g3498	360	Gene3D	-	103	302	-	-
	Ssu4g3498	360	Coils	Coil	283	303	-	-
	Ssu4g3498	360	PANTHER	V-TYPE ATP SYNTHASE SUBUNIT D	104	360	IPR002699	GO:0046961
	Ssu4g3498	360	TIGRFAM	V_ATPase_subD: V-type ATPase, D subunit	112	316	IPR002699	GO:0046961

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu4g3498	104	360	Primary Pumps ATPases(2)	AT3G58730	76.336	1.60e-142	402

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu4g3498	K02149		-	gmx:100801612	448.743