Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3457 ATGTCCCCATGCCTCGCCTCGCCGCACTCGCGCTTCCCTCTCACGTTCCCTGTGACTGGCTCTATTCCGCCGAACGCAGCATTTTTCCCCGTTCAGCTCTCCGGCAGAGTTAGGTTTACGGCGAGGATGGGTGAGGCTCTGCTGTCGGAGCTTGCGACGGAGATAGTCGTTCCGGCGTGTGCCGCTATCGGGATCGCGTTCTCGCTGGTGCAGTGGTTCCTGGTTTCGCGCGTCAAGCTCACGCCGGACCGAACGACGTCGTCGCCGCGCAACAACAAGAACGGCTACGGCGACTAccttatagaggaagaggaaggcATCAACGACCACAGCGTTGTTGTCAAATGCGCGGAGATACAGAGCGCCATCTCCGAAGGTGCAACATCCTTTCTTTTCACTGAATATCAATATGTGGGGATCTTCATGGTTGCTTTTGCAATACTGATCTTCCTTTTCCTGGGCTCTGTGGAAGGCTTCAGCACTAAGAGCCAGCCCTGCACGTATGATAAGAGCAAGCTATGCAAGCCCGCCCTTGCAACTGCATTGTTTAGCACTGTGTCTTTCTTGCTTGGTGCTATAACTTCAGTCCTATCTGGTTTCCTTGGGATGAAAATTGCAACCTATGCCAATGCTAGGACAACCTTGGAAGCGAGAAAGGGAGTTGGAAAGGCTTTTATTACTGCATTTAGGTCTGGTGCTGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTACTCTACATTGCCATCAATCTCTTCAAGCTATATTATGGTGATGATTGGGAAGGTCTTTTTGAGGCTATAACTGGATATGGTTTGGGCGGATCTTCCATGGCTCTGTTTGGGAGAGTCGGTGGTGGTATCTATACCAAGGCTGCTGATGTTGGCGCTGATCTGGTAGGAAAAGTTGAAAGAAACATACCAGAGGATGATCCAAGAAATCCAGCTGTGATTGCTGACAATGTTGGTGACAACGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGCTCATATGCTGAATCATCTTGTGCTGCCTTAGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCACGAGTTCACTGCAATGTTATATCCCTTACTCGTCAGTTCTATGGGCATTATTGTCTGTTTGATTACTACTCTCTTTGCAACTGATTTCTTTGAGATCAAGGCTGTGAAGGAAATTGAACCAGCTTTAAAAAAGCAGCTTATCATCTCTACAGTACTAATGACTGTTGGAATTGCAATTATTAGTTGGCTTGCTCTGCCAACATCCTTCACAATTTTCAACTTTGGCATTCAGAAGGAAGTTAAGAGCTGGCAGCTGTTCCTCTGTGTGGGTGTTGGTCTATGGGCTGGACTTATTATTGGGTTTGTTACCGAGTATTATACAAGCAATGCTTACAGcCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTGGGATACAAGTCTGTCATTATTCCTATTTTTGCCATTGCAATCAGCATTTTTGTGAGTTTTACTTTTGCTGCAATGTATGGTATTGCTGTGGCTGCCCTTGGGATGCTGAGCACCATTGCGACAGGGTTGGCTATTGATGCCTATGGGCCTATCAGTGATAATGCAGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGTATTCGTGAGAGAACTGATGCCCTTGATGCTGCTGGCAACACTACTGCTGCCATAGGCAAGGGATTTGCTATTGGGTCTGCTGCTCTGGTGTCTTTGGCCCTATTCGGTGCATTTGTGAGCAGAGCAGGAATTTCAACTGTTGATGTCTTGACTCCCAAGGTCTTTATTGGACTCATAGTTGGTGCCATGCTTCCATACTGGTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCTGCTTTGAAGATGGTTGAGGAGGTTCGCAGACAGTTCAACACCATTCCAGGACTCATGGACGGTCATGCCAAGCCTGATTATGCTACCTGCGTCAAAATTTCTACCGATGCTTCCATCAAGGAGATGATTCCTCCAGGTGCCCTTGTCATGCTCACACCACTCATTGTTGGCATCTTCTTTGGTGTGGAAACACTTTCTGGTGTTCTTGCGGGCTCTCTAGTTTCTGGCGTGCAGATTGCAATATCAGCATCCAACACTGGCGGTGCCTGGGATAATGCCAAGAAGTACATTGAGGCCGGTGCGTCTGAGCATGCAAGGACCTTGGGCCCAAAGGGATCTGAGCCGCATAAGGCAGCTGTTATTGGCGATACCATTGGAGACCCTCTTAAAGATACCTCAGGTCCTTCACTCAACATCCTCATTAAGCTCATGGCGGTTGAGTCACTTGTCTTCGCTCCATTTTTCGCCACTCACGGCGGCCTGCTTTTCAAGATCTTTTGA 2427 0.4763 MSPCLASPHSRFPLTFPVTGSIPPNAAFFPVQLSGRVRFTARMGEALLSELATEIVVPACAAIGIAFSLVQWFLVSRVKLTPDRTTSSPRNNKNGYGDYLIEEEEGINDHSVVVKCAEIQSAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVEGFSTKSQPCTYDKSKLCKPALATALFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTAMLYPLLVSSMGIIVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTVGIAIISWLALPTSFTIFNFGIQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMDGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3457 808 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 43 808 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3457 808 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 43 808 - -
Ssu4g3457 808 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 52 803 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3457 808 Pfam Inorganic H+ pyrophosphatase 114 793 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3457 808 PIRSF H+-PPtase 51 806 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu4g3457 808 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 51 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3457 Ssu-Chr4 85285875 85290897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3457 46 671 Primary Pumps ATPases AT1G15690 89.030 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3457 K23025 - gmx:100803691 1448.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3457 4 85285875 85290897 Ssu4g3457 4 85285875 85290897 ECH