Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3438 ATGAACAAGATGAGTGGTCTTGGTGGAGTAGTGGTGGCAATTTTAATGCTTCTAGTTCTACAGTACGCCCAGGCACAGATCAGAGTGCATGTGGTTGGAGATGACCAGGGTTGGAGAATTCCACAAGATGCCTCCACGTACCAAAATTGGGCTTCTGACAAGAATTTTACGATTGGAGATATATTAGcatttaatttcCAGACGGGGGAGCATAACGTAATTGAAGTGTCAGAAGAGTCATACAATTCGTGCAATTCAGCTAATGCTATAGGTACAATCTTCAGAACGGGCCCTACCAACATGACCCTCAACAGAGGCGGTGAACATTACTACATTTGTGGCGTTGGTCAGCACTGCACCAATGGGCAGAGGTTAGCCATCGCCGTCTCAGGCTCTTCCACCGCCGTTCCACCAGCTGCCACAGCCACTCCACCGCAACCTACGTCTTCTGCACCCACTTATTTCCCTACTTTCATtcccttcctcttcttctccgCATTCATGATTATAGCGTTTTAG 519 0.4489 MNKMSGLGGVVVAILMLLVLQYAQAQIRVHVVGDDQGWRIPQDASTYQNWASDKNFTIGDILAFNFQTGEHNVIEVSEESYNSCNSANAIGTIFRTGPTNMTLNRGGEHYYICGVGQHCTNGQRLAIAVSGSSTAVPPAATATPPQPTSSAPTYFPTFIPFLFFSAFMIIAF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3438 172 ProSiteProfiles Phytocyanin domain profile. 28 131 IPR003245 GO:0009055
Ssu4g3438 172 PANTHER BLUE COPPER PROTEIN 11 136 IPR039391 GO:0009055
Ssu4g3438 172 Pfam Plastocyanin-like domain 38 123 IPR003245 GO:0009055
Ssu4g3438 172 Gene3D - 27 140 IPR008972 -
Ssu4g3438 172 PANTHER STELLACYANIN 11 136 - -
Ssu4g3438 172 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
Ssu4g3438 172 CDD Stellacyanin 30 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3438 Ssu-Chr4 85011314 85012907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3438 12 148 Phytocyanin Superfamily AT2G25060 34.058 1.91e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3438 - - gmx:100305545 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3438 4 85011314 85012907 Ssu4g3438 4 85011314 85012907 ECH