Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3427 ATGAGTGGCAGAAATGCCAAAACAAACTTCCCAGTTGCTGAAAACGAAATGGGAAATCACAGTTCCACTACTTCCTCTTCCTCCACCACCACATTGTCTGCAGTTCTGAGTGCAAAGCTTCGAAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACTTGCCTAAGGCTTGACACCGAGAATTCCCACATTGGGGTGTGGCAGAAGCGAGCAGGCCCTCGTTCTGACTCAAACTGGATCATGATGGTTGAGTTGGAAAGGAAGAACAACGAGGGTGAGGGTCTTCTTCTGATTCAGAGTTCCCTGTTGTTGTTGATGCCCCAGAGAAGGTAA 330 0.4909 MSGRNAKTNFPVAENEMGNHSSTTSSSSTTTLSAVLSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDSNWIMMVELERKNNEGEGLLLIQSSLLLLMPQRR 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3427 109 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 90 - -
Ssu4g3427 109 MobiDBLite consensus disorder prediction 1 29 - -
Ssu4g3427 109 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3427 Ssu-Chr4 84899436 84899765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3427 1 84 AP2-EREBP Transcription Factor Family AT1G15360 57.447 3.25e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3427 - - gmx:100796962 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3427 4 84899436 84899765 Ssu4g3427 4 84899436 84899765 ECH