Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3368 ATGGCCAAGCTTCAACACACTAATCTTGTGAGGCTTTTGGGATTCTGCATCCAAAGAGATGAAAGAATACTAGTCTATGAGTACATGTCCAACAAGAGCTTGgacttttatttgtttgATGAAAGTAGAAAGAATGTGCTAGATTGGAAAAAACGCCTCAACATAATTGAAGGCATTGCTCAAGGACTTGTTTATTTACACAAATACTCTAGACTAAAGGTGATACATCGAGACTTGAAGGCAAGCAATATACTGCTTGATAAAGGAATGAATCCAAAAATATCTGACTTTGGCATGGCTAGAATATTTGGATTGCAAGGGTCTGAAGAAAACACAAACAGAGTTGTTGGAACATATGGTTACATGTCTCCAGAGTATGCAATTAATGGCATTGTGTCAGTCAAAACAGATGTATATAGCTTTGGTGTGTTGCTACTTGAGATTCTTAGTGGGATGAAGAATAACAGTTGCATCCACTCAAATCAACCATTCAATCTCATAGGACATGCTTGGCAACTATGGAATAAAGGTAGGGCTTTAGAATTGGTAGATCCATCATTGAATGAATCATACATTTCCGATGAAGTACTGAGGTGTACTCATATCGGACTCATGTGCGTACAAGATCATGCAACAGACAGACCCACCATGCAAGATGTTGTTTCATTCCTATCAAACAATACCACCCAACTCGATCAACCAAAGCAGCCAGCATTCTTTTTGCATGTGATTGTGGAGAGTTAA 744 0.379 MAKLQHTNLVRLLGFCIQRDERILVYEYMSNKSLDFYLFDESRKNVLDWKKRLNIIEGIAQGLVYLHKYSRLKVIHRDLKASNILLDKGMNPKISDFGMARIFGLQGSEENTNRVVGTYGYMSPEYAINGIVSVKTDVYSFGVLLLEILSGMKNNSCIHSNQPFNLIGHAWQLWNKGRALELVDPSLNESYISDEVLRCTHIGLMCVQDHATDRPTMQDVVSFLSNNTTQLDQPKQPAFFLHVIVES 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3368 247 PANTHER OS01G0783800 PROTEIN 1 239 - -
Ssu4g3368 247 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 239 - -
Ssu4g3368 247 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g3368 247 Gene3D Phosphorylase Kinase; domain 1 1 29 - -
Ssu4g3368 247 SUPERFAMILY Protein kinase-like (PK-like) 1 242 IPR011009 -
Ssu4g3368 247 Gene3D Transferase(Phosphotransferase) domain 1 30 239 - -
Ssu4g3368 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Ssu4g3368 247 PIRSF ILK 1 239 - -
Ssu4g3368 247 SMART serkin_6 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g3368 247 Pfam Protein tyrosine and serine/threonine kinase 1 224 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3368 Ssu-Chr4 84093463 84094472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3368 1 242 Receptor kinase-like Gene Family AT4G23150 59.917 7.38e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu4g3368 PK_Tyr_Ser-Thr 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3368 - - gmx:100809337 428.328