Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3363 ATGATAGGAcaacttaaagaaaaagaaaagaacacactCCACGGACCCAGCTCTACGTCGTCGTTTCAACGTTCCACACGTGCCTCACTATCGTCTTTCAGattcaaaaatattcaaagCATGTTTTCTTCTCCACTCACTCCATTCATTGGGTCCTATTACCTATATATCTTGGGTTTCACTCTGCACTACATAGCATGGTTTTGGTTGAACGTTGCTGAACTCGTTTCTCTTCTCATCTATTCCATTTCCATCCAATCAAATATGAACAGGCAGGGGCTGAGATCCGGTGTGGCGGGGGTGCACCATAGTCGCCAGTACTCCGACCACTATCTCGACGCCTCCTCCAAGTGGTTTCACTCCTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATTTGTACGGTGGGGGAGGGAGAATGTATAGGAGCAACGCGCAGAGGAGCTTCAATGAGTATTGTATGGATCCGTCCACGCCTCCTCGTAGTTACGCCGTTAAGAAGAACGGCGACGAAGATGATTCTCCTCGGGATTTCAGCCCTGGCCTCTTGGATCTCCATTCGTTCGATACGGAGCTTCTTCCTCAGATTCCGTCCTCGAATGTGTATGATTCTGAGCCTTACATTTTCAGCAAACAAACTGTCAGAGCTCGCGCCCCTGAGAACAGTGTCTCCAATAGTCTTGCTGCGGACAATGTGAAATCTAGTAATGTGGCTAAGATTAAAGTTGTGGTTCGCAAGAGACCGCTTAATAAGAAGGAGATAGCTAAGCATGAGGAGGATATTATAGATACAGTTTCGAATTCTTTAACAGTGCACGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTAGAGAAGCACGAATTTGTTTTTGATGCCGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATATTTCAACGCACAAAGGCAACTTGCTTTGCATATGGTCAAACTGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCAAGGGACATCTTGCGATTGATGCATCATACCTACAGGAATCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGAGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCGAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAATGAGGAGTCTTCACGGTCACATGCGATACTTCAGCTTGCTATCAAGAGATCAGTTGATGGAAATGTATCCAAGCCTCCTCGTGTTGTTGGGAAGCTTTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCGGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGTTTGCTTGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTCTGAGGGATTCATTTGTTGGTGATTCCCGCACTGTTATGATATCATGCATATCACCAAGTTCCGGTTCATGCGAACATACCCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCAAAAGGGAACAATTCTAAGAAGGATGTTTTAGCTTCAAATTTTAACCTTAAAGAATCAACCACTATTCCCTTGTCTTCCATTAATACATATGCCTACGAGGATCGCGCAGCTGATACATGGCCTGAAGAAAATGATGGGGATGAATTTAGTCCTCCTGAAGATTACTGTGAACCGTTGAAACCATCATGGAAGAAAAATGGAAAGATAGAGCCATATGGTGCAACAGATGACAAATTTAAGAAACCCAATGGCCAGATCAAATGGAAGGACATCCCAAAAGTTGAACCTAAAACAGTACATTCAGATAATGATTTGAATGCCCTCTTACAGGAAGAAGAAGACCTCATAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTGTTGGTTGAAGCAGATCAACCAGGTAATCAGTTGGATGATTATATAGCAAAACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCATGCAGTTACAAACCCGTTTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAACGTTTTGGCTTCATCTGCtggttaa 2265 0.4203 MIGQLKEKEKNTLHGPSSTSSFQRSTRASLSSFRFKNIQSMFSSPLTPFIGSYYLYILGFTLHYIAWFWLNVAELVSLLIYSISIQSNMNRQGLRSGVAGVHHSRQYSDHYLDASSKWFHSSSNHIPPLQDYNLYGGGGRMYRSNAQRSFNEYCMDPSTPPRSYAVKKNGDEDDSPRDFSPGLLDLHSFDTELLPQIPSSNVYDSEPYIFSKQTVRARAPENSVSNSLAADNVKSSNVAKIKVVVRKRPLNKKEIAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLASNFNLKESTTIPLSSINTYAYEDRAADTWPEENDGDEFSPPEDYCEPLKPSWKKNGKIEPYGATDDKFKKPNGQIKWKDIPKVEPKTVHSDNDLNALLQEEEDLINAHRKQVEETMNIVREEMNLLVEADQPGNQLDDYIAKLNAILSQKAAGIMQLQTRLAHFQKRLKEHNVLASSAG 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3363 754 Gene3D Kinesin motor domain 215 566 IPR036961 -
Ssu4g3363 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 563 IPR027417 -
Ssu4g3363 754 CDD KISc_KIF2_like 240 561 - -
Ssu4g3363 754 PANTHER KINESIN-LIKE PROTEIN KIN-13B 88 754 - -
Ssu4g3363 754 MobiDBLite consensus disorder prediction 1 25 - -
Ssu4g3363 754 PRINTS Kinesin heavy chain signature 320 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g3363 754 PRINTS Kinesin heavy chain signature 429 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g3363 754 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g3363 754 PRINTS Kinesin heavy chain signature 463 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g3363 754 ProSitePatterns Kinesin motor domain signature. 462 473 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu4g3363 754 Coils Coil 673 704 - -
Ssu4g3363 754 SMART kinesin_4 238 569 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g3363 754 Pfam Kinesin motor domain 246 562 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g3363 754 PANTHER KINESIN-RELATED PROTEIN 6 88 754 - -
Ssu4g3363 754 ProSiteProfiles Kinesin motor domain profile. 240 563 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3363 Ssu-Chr4 84057350 84062081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3363 239 563 Calmodulin-binding Proteins AT5G65930 33.731 4.37e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3363 K10393 - gmx:100802651 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3363 4 84057350 84062081 Ssu4g3363 4 84057350 84062081 ECH