Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3294 ATGAACATTGGAGCACTTGTTCTACTCTTTGCATTTTTCTTCCTGAGTTGTGGGTATGCACAAGACACCCTTGTGCCTGCAATCATAACATTTGGTGACTCTGCAGTGGATGTGGGGAATAATGACTATCTTCCAACCCTTTTCAAAGCTGATTACCCTCCTTATGGGAGGGACTTTGTTAACCAACAACCTACTGGGAGGTTTTGCAATGGGAAATTAGCTACTGATTTTACCGCTGACACATTGGGTTTTAAGACTTATGCTCCTGCATATCTTAGCCCACAGGCATCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTATTTTGAATCATGCGATTCCATTGTCCCAACAGTTAAGTTATTACAAGGAATACCAAGGCAAGCTAGCCAAGGTAGCTGGCAGTAAAAAAGCAGCCTCGATTATCAAGGATGCATTGTACTTGCTGAGTGCTGGCAGCAGTGACTTTGTGCAAAATTATTATGTCAATCCTTGGATCAATAAAGCCGTCACTCCTGATCAGTATTCATCCTACTTAGTGGGTGTATTCTCAAGCTTTGTTAAGGACTTGTATGGATTGGGAGCCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCCCAAGGATTTAACAAGAAGATCAACTCAGCTGCAGCAAATCTTCAAAAGCAACTCCCGGGTCTTAAGATTGCGGTTTTTGACATTTACAAGCCTCTCTATGACCTTGTTCAGTCCCCTTCAAAATCCGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGTACCGGGACTGTAGAGACAACATCCTTATTGTGTAATCCAAAATCACCAGGAACTTGTTCTAATGCCACCCAGTATGTGTTTTGGGACAGTGTCCATCCTTCTCAAGCTGCTAACCAAGTTCTAGCCGATGCATTAATTGTACAAGGCATAGCTCTTATCACATAA 1053 0.433 MNIGALVLLFAFFFLSCGYAQDTLVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNQQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLSYYKEYQGKLAKVAGSKKAASIIKDALYLLSAGSSDFVQNYYVNPWINKAVTPDQYSSYLVGVFSSFVKDLYGLGARRLGVTSLPPLGCLPAARTLFGFHENGCVSRINTDAQGFNKKINSAAANLQKQLPGLKIAVFDIYKPLYDLVQSPSKSGFVEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALIVQGIALIT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3294 350 CDD SGNH_plant_lipase_like 26 342 IPR035669 -
Ssu4g3294 350 Gene3D SGNH hydrolase 17 345 IPR036514 -
Ssu4g3294 350 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 349 - -
Ssu4g3294 350 PANTHER GDSL ESTERASE/LIPASE EXL3 4 349 - -
Ssu4g3294 350 SUPERFAMILY SGNH hydrolase 28 341 - -
Ssu4g3294 350 Pfam GDSL-like Lipase/Acylhydrolase 28 340 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3294 Ssu-Chr4 83084129 83085722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3294 3 342 Pollen Coat Proteome AT1G75910 33.236 1.03e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3294 - - gmx:100815273 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3294 4 83084129 83085722 Ssu4g3294 4 83084129 83085722 ECH
Ssu8g0270 8 3998558 4003515 Ssu4g3294 4 83084129 83085722 PCT