Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3246 ATGGCTAGTGGAGAGGCTGGTGAGCAGTTTTGCTTAGTGTTTCTCTTGTGCACCGTGATCCTCTACAGGAACAGGCTTAGCCTTGTgctcaaatcaaaatatagtaaCCAGCTTCCATTAGGCACTCTTGGATGGCCTTTTATCGGTGAAACCATTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGCCGCCGCATGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACAATTGTTTCCACGGATGCTGATGTCAATAAGTTTATACTTCAAAGTGATGCAAAGGTTTTTGTTCCCTCTTATCCCAAGTCTCTAACTGAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAGAGGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCCAAGAATCAATGGCAAGTTGGAGAGAGGGCTGCCCCATATACATACAAGATGAAACAAAGAAGATTGCTTTTCATGTACTAGCCAAGGCATTGATTAGTTTGGAACCGGGAGAAGAAATGGAGCTTCTAAAGAaacattttcaagaatttatctCTGGCCTCATGTCTTTACCCATTAACCTACCAGGAACTAAACTTTATCAATCTTTGCAGgcaaaaaagaaaatggtgaaATTAGTGCGGAAAATTATCCTAGCTAAAAGAAATAGTGGCATCTGCAAAGTTCCAAAAGATGTGGTGGATGTGCTTCTTAATGATGCAAGTGAAAAATTGACGGATGATTTAATAGcagataatattattgatatgatGATTCCAGGGGAAGACTCAGTGCCAGTTCTTATGACTCTAGCTACAAAATATCTATCGGAATGTCCTGCTGCTTTGCAACAGTTGACGGAGGAAAATATGAAGCTTAAGAAACTTCAAGATCAGGTTGGGGAGTCCTTGTGTTGGAGCGATTACTTATCAATGCCATTTACTCAAACAGTCATCACTGAAACTCTGAGAATGGGAAATATTATAATTGGAGTTATGAGAAAGGCCTTAAACGATGTTGAAATAAAAGGGCACTTAATACCACAAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGACAAAAACTATGAATGGCCATATCAGTTCAATCCATGGAGGTGGCAAGACAAAGACATGAGCAGTTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGCCCTGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTCCACTACCTTGTCACTCAATTCAGATGGCATGCTGAAGAAGATACAATAGTGAACTTCCCTACAGTAAGAATGAAAAGGAGGATGCCTGTCATGGTAAGGAGAGTGGAATCTTAA 1428 0.3999 MASGEAGEQFCLVFLLCTVILYRNRLSLVLKSKYSNQLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRRRMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVQESMASWREGCPIYIQDETKKIAFHVLAKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRKIILAKRNSGICKVPKDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMKLKKLQDQVGESLCWSDYLSMPFTQTVITETLRMGNIIIGVMRKALNDVEIKGHLIPQGWCVFANFRSVHLDDKNYEWPYQFNPWRWQDKDMSSCNFTPFGGGQRLCPGLDLARLEASIFLHYLVTQFRWHAEEDTIVNFPTVRMKRRMPVMVRRVES 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3246 475 SUPERFAMILY Cytochrome P450 36 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 Gene3D Cytochrome P450 30 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 20 468 - -
Ssu4g3246 475 Pfam Cytochrome P450 39 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3246 475 PANTHER CYTOCHROME P450 26 20 468 - -
Ssu4g3246 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3246 Ssu-Chr4 81981453 81987510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3246 29 446 Cytochrome P450 AT3G13730 67.612 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3246 K12638 - gmx:100797868 852.047