Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g3207 | ATGGAACCTCGAGTTGGAAACAAGTTCCGTCTCGGTCGGAAGATTGGTAGCGGATCCTTCGGGGAGATCTATCTCGGAACTAATATTCAGACAAATGAAGAGGTTGCAATTAAGCTTGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCAAAGCTGTATAAGATACTGCAAGGAGGAAATGGGATTCCAAATGTGAAATGGTATGGTGTTGAAGGAGAGTACAATGTGCTCGTGATGGATTTACTTGGCCCTAGTCTTGAGGATTTATTCAACTTCTGTAGTCGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAAATGATAAATCGAGTTGAATTTGTTCATTCCAAATCATTTTTACATCGGGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGACGTGCGAATCAAGTGTATATTATTGACTTTGGCCTTGCTAAGAAATACAGAGACACCACTACACATCAGCATATTCCTTACAGAGAGAACAAGAATTTGACAGGAACTGCTAGGTATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGATGATTTAGAGTCACTTGGATACGTTCTTATGTACTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAAGATTAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTACTGTCGGTCACTGAGGTTTGATGATAAACCAGATTATCCTTATTTGAAAAGACTTTTACGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGACTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCGCAAAGTGCCACTGCCCCTACCCGTGCTATTGGTCCTGCTGCTGGACCAAGTTCAGGTCTGCCACCACAGGCTGCAAATGCTGATGGACAGTTAGGTGGAGAGGATGGTAGGCATACTAATTGGTCTTCATCAGATCCTACTCGTAGGAGAAACTCTGGACCTATTGCTAATGATGGAATCTTATCTAGACAAAAAGCCCCAGTTACATATGACTCAAATGGATCTAAAGATGCTATGTTGTCAAGTTCTAATTTCTTCCGGTCAAGTGGATCTGCAAGGCGAGGTGCTGTCTCAGGGTCAGGCAGCCGTGATGTAGTTGTTGGCAGTGAGACCGAGTCCTCTCGTCCTCTGACCCTGGATTCAAGTCAGGGAGCACTTCGTAAAATCTCTGGTGCTCCGAGAAGTTCAGCTATCATGTCATCTGAGCACAACCGAACATCCTCTGGCAGAAACACGTCATCGAACATAAAGAATTTGGAGACGACTCTTAGGGGTATTGAGAGCCTGCATTTCAATGACGAGAGGGTACAATATTAG | 1431 | 0.427 | MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLESVKTKHPQLLYESKLYKILQGGNGIPNVKWYGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYPYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQSATAPTRAIGPAAGPSSGLPPQAANADGQLGGEDGRHTNWSSSDPTRRRNSGPIANDGILSRQKAPVTYDSNGSKDAMLSSSNFFRSSGSARRGAVSGSGSRDVVVGSETESSRPLTLDSSQGALRKISGAPRSSAIMSSEHNRTSSGRNTSSNIKNLETTLRGIESLHFNDERVQY | 476 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g3207 | 476 | MobiDBLite | consensus disorder prediction | 304 | 454 | - | - | |
Ssu4g3207 | 476 | MobiDBLite | consensus disorder prediction | 364 | 394 | - | - | |
Ssu4g3207 | 476 | Pfam | Protein kinase domain | 10 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g3207 | 476 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu4g3207 | 476 | PANTHER | CASEIN KINASE 1-LIKE PROTEIN 2 | 1 | 459 | IPR030509 | GO:0004672|GO:0005524 | |
Ssu4g3207 | 476 | SMART | serkin_6 | 9 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g3207 | 476 | ProSiteProfiles | Protein kinase domain profile. | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g3207 | 476 | PANTHER | CASEIN KINASE-RELATED | 1 | 459 | - | - | |
Ssu4g3207 | 476 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 311 | - | - | |
Ssu4g3207 | 476 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 290 | IPR011009 | - | |
Ssu4g3207 | 476 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Ssu4g3207 | 476 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - | |
Ssu4g3207 | 476 | MobiDBLite | consensus disorder prediction | 402 | 454 | - | - | |
Ssu4g3207 | 476 | MobiDBLite | consensus disorder prediction | 334 | 349 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g3207 | Ssu-Chr4 | 81154503 | 81158628 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g3207 | 7 | 214 | CBL-interacting serine-threonine protein kinases | AT5G58380 | 28.085 | 8.69e-13 | 68.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Ssu4g3207 | Pkinase | 3.9e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g3207 | K02218 | - | gmx:100787808 | 827.009 |