Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3165 ATGAAAAAATTGGAAATTGAAGGGAAAGGAAAACCGAATGGAGAAATACCAGAAAGTGCAGAAGGGTCATATGGGAAGGTGTACCTGGCAGTGGAGAAGgcgagtacgagaatggtagcTCTGAAGAAGATCCGTTTTGAGATCAATGTCAGGAACGGTATCGATTCCACTATCCTCCGGGAGATTGCTATCCTTCGAACTGGTGGACAAGATCCCCAAGTCCGAGGCCACCTCCTCCTTCAACCCCAAAACAAGGCCAACTTTGTACCTCGTCTTCGAGTTCGATCTGATGAGGTACTTGGGACAGAACCAGCCAAACCTTGA 324 0.4444 MKKLEIEGKGKPNGEIPESAEGSYGKVYLAVEKASTRMVALKKIRFEINVRNGIDSTILREIAILRTGGQDPQVRGHLLLQPQNKANFVPRLRVRSDEVLGTEPAKP 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3165 107 Gene3D Phosphorylase Kinase; domain 1 15 89 - -
Ssu4g3165 107 SUPERFAMILY Protein kinase-like (PK-like) 21 68 IPR011009 -
Ssu4g3165 107 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3165 Ssu-Chr4 80123676 80124070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3165 21 74 Core Cell Cycle Gene Families AT1G76540 55.556 4.14e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3165 K07760 K02206 pvm:113822976 55.4546