Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3126 ATGGCAATAGAATTGGCATCTCCCAATTGGGTACTTTCAACCGCAGCCACATGTTTTGCAACCTTCGCcgtcctcctcctcctccaccgcCTCCGCCGCCACCGCAGATACAATCTGCCTCCAGGCCCAAAACCCTGGCCCATCATAGGGAACCTGAATCTCATTGGATCCCTCCCGCACCAGTCTATCCACGCTCTCAGCCGAAAATACGGGCCCATCATGCATGTGTGGTTCGGGTCCAACCCTGTCGTCGTGGGCTCCTCCGTGGCCATGGCAAAGGCCTTCCTCAAAACCCACGACGCCACCCTCGCCGGAAGGCCCAAATTCTCCGCCGGCAAATACACAACCTACAACTACTCGGACATAACGTGGTCCCAGTACGGCCCATACTGGCGCCAGGCCCGTAGAATGTGCCTACTGGAATTGTTCAGCGCCAAACGCCTCGAGGAATATGAGTACATTAGAAAACAAGAGCTACGTGCTCTTCTTAATGAACTCTTCAAATCCGCTAACAAAGCCGTTATGTTGAAAGACCATCTTTCGAACCTGAGCCTCAACGTTATAAGCCGCATGGTGTTGGGGAAGAAGTACTTGGAAGAGTCCGAAAACGCCATCGTTTCCCCCGAGgagttcaagaagatgctcgATGAGCTGTTCTTGCTTAACGGGGTTTTGAACATTGGTGACTTCATCCCTTGCATTAACTTCTTGGACCTTCAGGGCTACATAAAGAGGATGAAGGCTTTGAGCAAGAAGTTGGATAGGTTTATGGAGCACGTGTTGGACGAACACATTGAGAGAAAGAAAGCGGTGAAGGATTATGTGGCGAAGGACATGGTGGATGTGCTTTTGCAGCTAGCGGAGGATCCTACTCTTGACGTCAAGCTTGAGAGGAATGGAGTCAAGGCTTTTACACAGGACATAATAGCAGGTGGGACTGAGAGCTCTGCAGTAACCGTAGAATGGGCAATCGCTGAGCTGTTGAGAAGGCCAGAGATTTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTAATAGGGAGAGAAAGATGGGTTGAAGAGAAGGACATTGTGAATTTACCTTACATTAATGCCATTGCCAAGGAAGCAATGAGGCTGCACCCTGTGGCACCAATGTTGGTGCCAAGACTAGCCAGGGAGGACTGCCAAATTGATGGGTATGATATCCCCAAAGGGACCCAAGTGTTTGTCAATGTTTGGACCATTGGTAGAGATCCTGCAATTTGGGACAATCCAATAGAATTCCAACCAGAGAGGTTTCTGGGTAAGGAGATTGATGTGAAGGGGCATGACTATGAGCTATTGCCATTTGGCGCTGGTAGAAGGATGTGCCCTGGGTACCCTCTTGGCATTAAGGTGATTCAAGCAAGTTTGGCCAACCTGTTGCATGGATTTAACTGGAGACTGCCTGATAACGTAAAGAAGGAGGATTTGAATATGGACGAGATTTTTGGGTTGTCTTTACCTAAGAAAATACCTCTGGAAACAGTTGCTGAGCCTAGACTTCCACTTCATCTTTATTCCCTTTGA 1548 0.4761 MAIELASPNWVLSTAATCFATFAVLLLLHRLRRHRRYNLPPGPKPWPIIGNLNLIGSLPHQSIHALSRKYGPIMHVWFGSNPVVVGSSVAMAKAFLKTHDATLAGRPKFSAGKYTTYNYSDITWSQYGPYWRQARRMCLLELFSAKRLEEYEYIRKQELRALLNELFKSANKAVMLKDHLSNLSLNVISRMVLGKKYLEESENAIVSPEEFKKMLDELFLLNGVLNIGDFIPCINFLDLQGYIKRMKALSKKLDRFMEHVLDEHIERKKAVKDYVAKDMVDVLLQLAEDPTLDVKLERNGVKAFTQDIIAGGTESSAVTVEWAIAELLRRPEIFKKATEELDRVIGRERWVEEKDIVNLPYINAIAKEAMRLHPVAPMLVPRLAREDCQIDGYDIPKGTQVFVNVWTIGRDPAIWDNPIEFQPERFLGKEIDVKGHDYELLPFGAGRRMCPGYPLGIKVIQASLANLLHGFNWRLPDNVKKEDLNMDEIFGLSLPKKIPLETVAEPRLPLHLYSL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3126 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PANTHER CYTOCHROME P450 98A9 7 514 - -
Ssu4g3126 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Ssu4g3126 515 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 Pfam Cytochrome P450 40 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 Gene3D Cytochrome P450 32 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g3126 515 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3126 Ssu-Chr4 79280597 79285740 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3126 16 515 Cytochrome P450 AT5G07990 43.689 1.69e-148 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3126 K20623 - gmx:100790480 936.021