Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3123 ATggcttcttcattctctctcctCTTATTCTGTTTCTTCGTGTCCGTTTCTGTTTGTGTTTCCTCCTCCTCATCGGACGATCCACGAACCTACATCATCCACGTGGCGCAATCCCAGAAGCCCTCCCTCTTCTCCGCGCACCACCACTGGTACTCCTCCCTCCTCggctccctccctccctccccccATCCCGCCACCCTCCTCTACACCTACTCCTCCGCCGCCACCGGCTTCTCGGCCCGCCTCACCGCCGCCCAGTCCTCCCACCTCGCCCGCCACCCGGGCATCGTCTCCGTCGAGGCCGACCAAATCCGCCACCCACACACCACCCGCACCCCGCGCTTCCTCGGCCTCGCCGACTCCTTCGGGCTCTGGCCCCACTCCGACTACGCCGACGACGTCATCGTCGGCGTCCTCGACACCGGAATCTGGCCGGAACTCCAAAGCTTCTCCGACCACAACCTCTCCCCGATCCCCTCCACCTGGAAAGGCACCTGCCAAAACTCCCGCGACTTCCCCTCCTCCCTCTGCAACAAAAAAATCATCGGCGCCAAAGCCTTCTACAAAGGCTACGAAGCCTACCTCGAACGCCCCATTGACGAGTCCCAGGAATCAAAATCTCCCAGAGACACCGAAGGCCACGGAACTCACACCGCTTCCACCGCAGCAGGCGGTGTCGTCTCCAACGCGAGCTTGTTCCACTACGCGCGGGGCGAGGCGAGAGGAATGGCCACCAAGGGGAGAATCGCCGCGTACAAGATCTGCTGGAAACTCGGCTGCTTCGATTCCGACATCCTCGCCGCCATGGACGACGCCGTCTCCGACGGCGTCGACGTGATCTCGCTCTCCGTCGGCGCCAACGGCTACGCGCCTCAGTATTACCGCGACTCAATCGCGGTGGGCGCGTTCGGAGCTTCTCAGCACGGCGTCCTCGTGTCTTGCTCCGCCGGGAATTCAGGGCCGGGTCCTTTCACCGCCGTTAACATCGCGCCGTGGATTTTGACCGTTGGAGCCTCCACCATCGATCGAGAGTTTCCCGCTGATGTAATTCTCGGGGATGGTAGAGTTTTTAACGGGGTGTCTTTGTATTACGGCGAGGGTTTACCCGATTTTAAGCTTCCTTTAGTTTACGCGGCGGATTGTGGGAGTAGGTATTGCTACATGGGGTCTCTGGAACCTTCGAAAGTTCAGGGGAAAATTGTCGTGTGTGATAGGGGAGGGAATGCTAGAGTTGAGAAGGGGAGTGCGGTGAAGCTTGCAGGGGGGTTGGGGATGATTTTGGCCAACACCGAAGCAAGTGGTGAAGAGCTTCTTGCTGATGCGCATCTTTTGGCGGCTACCATGGTGGGTCAAAGTGCTGGGGATAAGATTAAGGAGTATATAAAGTTGAGTCAGTTCCCTACGGCGACGATCGGGTTTAGAGGGACTGTGATTGCGGGTTCTCCTTCTGCTCCTCAGGTTGCCTCGTTTTCTAGCCGCGGACCGAGCCACCTTACTAAGGAGATTCTCAAGCCGGATGTTATTGCTCCGGGGGTGAACATTTTGGCTGGGTGGACTGGGAGGGTGGGGCCCACGGATTTGGACATCGATCCTAGGAGGGTTGAGTTTAACATAATTTCGGGGACTTCTATGTCGTGTCCGCATGCTAGTGGCATTGCGGCGCTGCTTAGGAAGGCATATCCTGAGTGGTCGCCTGCGGCTATTAAGTCTGCCTTGATGACAACGGCTTATAATGTGGATAACTCCGGGGGGAGTATTAAGGATCTTGGGACTGGGAAGGAGTCGAACCCGTTTGTTCATGGGGCTGGACATGTTGATCCCAACAGGGCTCTTAACCCGGGGTTGGTTTATGATTTGGATATTAATGACTATTTGGCGTTCTTGTGTTCGATTGGGTATGGTGCTAGTCAGATTGCAGTTTTCACTAGAGAGCCTGCTGCTGAAAATGTTTGTGAAGGGAAAGTGGGTAGGACTGGGAGCTTGAGTGGCCCGGGTGATTTGAATTACCCTTCTTTCTCTGTGGTGTTGGGTGCGGAAAGTGGAGTGGTTAAGTATAAACGGGTTGTTACTAATGTGGGAAGTTTGGCTGATGCTGTTTACACTGTTAAAGTGAATGCTCCTCCTGGTGTCGATGTTAGTGTCAACCCCGGTAAGCTTGTGTTCGGTGATGAAAACAAGACGCAGGGATTTGAGGTTACGTTTACTAGAGTTGCGTACGCTAGTTCCGAGAGTTTTGGGTCCATTGAGTGGACTGACGGAAGTCACGTTGTGAGGAGCCCAATTGCTGTGAGATGGAGCGGTGGATTCTCCTCATCTATTTGA 2322 0.5439 MASSFSLLLFCFFVSVSVCVSSSSSDDPRTYIIHVAQSQKPSLFSAHHHWYSSLLGSLPPSPHPATLLYTYSSAATGFSARLTAAQSSHLARHPGIVSVEADQIRHPHTTRTPRFLGLADSFGLWPHSDYADDVIVGVLDTGIWPELQSFSDHNLSPIPSTWKGTCQNSRDFPSSLCNKKIIGAKAFYKGYEAYLERPIDESQESKSPRDTEGHGTHTASTAAGGVVSNASLFHYARGEARGMATKGRIAAYKICWKLGCFDSDILAAMDDAVSDGVDVISLSVGANGYAPQYYRDSIAVGAFGASQHGVLVSCSAGNSGPGPFTAVNIAPWILTVGASTIDREFPADVILGDGRVFNGVSLYYGEGLPDFKLPLVYAADCGSRYCYMGSLEPSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGMILANTEASGEELLADAHLLAATMVGQSAGDKIKEYIKLSQFPTATIGFRGTVIAGSPSAPQVASFSSRGPSHLTKEILKPDVIAPGVNILAGWTGRVGPTDLDIDPRRVEFNIISGTSMSCPHASGIAALLRKAYPEWSPAAIKSALMTTAYNVDNSGGSIKDLGTGKESNPFVHGAGHVDPNRALNPGLVYDLDINDYLAFLCSIGYGASQIAVFTREPAAENVCEGKVGRTGSLSGPGDLNYPSFSVVLGAESGVVKYKRVVTNVGSLADAVYTVKVNAPPGVDVSVNPGKLVFGDENKTQGFEVTFTRVAYASSESFGSIEWTDGSHVVRSPIAVRWSGGFSSSI 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3123 773 Pfam PA domain 372 457 IPR003137 -
Ssu4g3123 773 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Ssu4g3123 773 Gene3D - 628 765 - -
Ssu4g3123 773 ProSiteProfiles Serine proteases, subtilase domain profile. 113 611 - -
Ssu4g3123 773 MobiDBLite consensus disorder prediction 199 221 - -
Ssu4g3123 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 768 IPR045051 -
Ssu4g3123 773 SUPERFAMILY Subtilisin-like 107 615 IPR036852 GO:0004252|GO:0006508
Ssu4g3123 773 Pfam Subtilase family 132 582 IPR000209 GO:0006508|GO:0008236
Ssu4g3123 773 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Ssu4g3123 773 MobiDBLite consensus disorder prediction 199 213 - -
Ssu4g3123 773 CDD PA_subtilisin_like 348 471 - -
Ssu4g3123 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 108 IPR037045 -
Ssu4g3123 773 Gene3D - 342 479 - -
Ssu4g3123 773 SUPERFAMILY PA domain 369 473 IPR046450 -
Ssu4g3123 773 SUPERFAMILY Protease propeptides/inhibitors 28 106 - -
Ssu4g3123 773 CDD Peptidases_S8_3 106 577 IPR034197 -
Ssu4g3123 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Ssu4g3123 773 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Ssu4g3123 773 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Ssu4g3123 773 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Ssu4g3123 773 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
Ssu4g3123 773 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 19 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3123 Ssu-Chr4 79174255 79176705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3123 8 768 Subtilisin-like Serine Gene Family AT3G14067 66.016 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3123 - - gmx:100793990 1328.92