Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3121 ATGTGGTCTTCAAATGTGGCAATATATTCAAACCAGGCaagtaaaatcaattatttggaTGATGAAAGGCCTCCCTGGGGATGGAGTGATGGGTCCATGGAGAACACCGGGATGTCGTTCTCTGTTTCAAAGCTTTTTCTGCTGATGGAGATGCCACTGGCAATTCCTAGGCAGCTAACAATTCCAATGGTCAGTGAGGAAGTATGGTCAAAGCCGTATGCTGTGGCCAGTGCTTCATTGGCTCCCATTCTCCTAGTCTTTTTGTGGAGCACTCAAGATAATGTGAGTAATCAGAGCGTTATACTTTCTTATTGTGTTGGTGTTGCTCTTGGATGCACATTTGGTATTCTTGCATATAACTGCACAGTGTCTGATCATCCGCCGCGTCAGTTTTTGCTTCCTTGGGTTCTTGGAGGATTCATCATGAGCATAGTGTGGTTCTACATAATAGCAAATGAGCTTGTGGCTCTATTGGTAGCATTTGGTGTAATTTTTGGAATTAATCCATCCATCTTGGGGTTAACCGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTTGCATTGGCATTGGAAGGAGAAGATGGAGTTCAGATTGCTTTATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGCTTGGGGATCTCGTTGCTGCTTGGTGCCTGGTCAAAGAAACCCTCTTTGTACGTGGTCCCTGAAGACAGTAGCTTATTTTACACAATGGGATTTCTGATCACAGGACTACTATGGGCACTTGTTGTGTTACCTCGCAACAACATGCATCCTAACAGAATGTTAGGAATGAGTCTCATCAccctttatttgatatttctttctttcaggGTGTGCACTTCTATGGGGCTTGTAACGCTTGCTGGTTTAAGTTGA 906 0.4183 MWSSNVAIYSNQASKINYLDDERPPWGWSDGSMENTGMSFSVSKLFLLMEMPLAIPRQLTIPMVSEEVWSKPYAVASASLAPILLVFLWSTQDNVSNQSVILSYCVGVALGCTFGILAYNCTVSDHPPRQFLLPWVLGGFIMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALALEGEDGVQIALSGCYAGPMFNTLVGLGISLLLGAWSKKPSLYVVPEDSSLFYTMGFLITGLLWALVVLPRNNMHPNRMLGMSLITLYLIFLSFRVCTSMGLVTLAGLS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3121 301 PANTHER CATION/CALCIUM EXCHANGER 4 1 297 - -
Ssu4g3121 301 Pfam Sodium/calcium exchanger protein 136 287 IPR004837 GO:0016021|GO:0055085
Ssu4g3121 301 Gene3D - 73 289 IPR044880 -
Ssu4g3121 301 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3121 Ssu-Chr4 79163284 79164189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3121 43 295 Antiporters AT5G17860 51.181 9.59e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3121 K13754 - gmx:100796101 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3121 4 79163284 79164189 Ssu4g3121 4 79163284 79164189 ECH