Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3120 ATGAAAGCGccaaatgctttgtttggtgcAAGACGCAGAAAGTTTCATGGGGTTTTCAACGGTTTGTGTGCCATGGTcgtgtttttcttcttttacaatCGGGAAGACATCATTCGCAACCCGATTCTTAGGCAATCCTCGTATTTTTCGAATCATGGGTTGCCTCAAAATGCGATTTTGAAAGATGGGCATTCTGTGATTCACCGTCGAATGGTTGGAATCAACCCCAACACTTCAGGTGTAGCCGGTGACAATGATTTGGGTGTGAGTAGCTCTGGATTATGTGTTGGGTTGGTCCACCATGATGGTTATGCTAGCCCCTGTGAATTCTTAAAGGTCAATCCACAGTGTTCTTCTGATGGGTATCTTGATTACTTGAAGTTTTTCTATTGTACATGTCAGAGTTTTAGGGTGTTTGGTTATCTAGTATTTGGTTTGTGGCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCTGCAGACTACTTTTGCCCTTCTCTTGAGCATCTCTCAAGGCTCTTGAAGTTGCCTCCAACTGTGGCTGGGGTTGTGCTGCTTCCACTTGGGAATGGAGCACCTGATGTGTTTGCAAGTATAGCTGCCTTTGTGGGTACTGAAAGTGGTGAAGTGGGTCTTAACAGTGTGTTGGGTGGTGCTTTTTTTGTTACCACTATTGTTGTTGGAGCTGTTTCCCTGTGTGTTGCGGATAAGGAGATTGGAATTGATCGAAGGTGCTTTATAAGGGATGTGAGTTTCTTTCTTGTCACACTTTTTTCACTGCTTTTGATTTTGGTTGTCGGTAAGGTGGGTGTTGGGGCGGCGGTTGCTTTTATATCGATTTATGTTGTGTATGCATTCATTGTTGCTGCCAATGAGATATTGAGGAAACATGCACAGAGGTTGAAATTGGATGGTGTCACACCTTTGCTTCCTGTCCAGGGAAGTGTGTTCTCTCTAGGTTCGGAAGAGGAAACTTCTATATAG 984 0.4238 MKAPNALFGARRRKFHGVFNGLCAMVVFFFFYNREDIIRNPILRQSSYFSNHGLPQNAILKDGHSVIHRRMVGINPNTSGVAGDNDLGVSSSGLCVGLVHHDGYASPCEFLKVNPQCSSDGYLDYLKFFYCTCQSFRVFGYLVFGLWLAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFASIAAFVGTESGEVGLNSVLGGAFFVTTIVVGAVSLCVADKEIGIDRRCFIRDVSFFLVTLFSLLLILVVGKVGVGAAVAFISIYVVYAFIVAANEILRKHAQRLKLDGVTPLLPVQGSVFSLGSEEETSI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3120 327 Pfam Sodium/calcium exchanger protein 145 288 IPR004837 GO:0016021|GO:0055085
Ssu4g3120 327 PANTHER CATION/CALCIUM EXCHANGER 3 1 324 - -
Ssu4g3120 327 Gene3D - 176 307 IPR044880 -
Ssu4g3120 327 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3120 Ssu-Chr4 79162239 79163222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3120 83 269 Antiporters AT5G17860 50.802 5.41e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3120 K13754 - gmx:100796101 560.066