Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3119 ATGTCTGCACCTATGATCATTGACCCTATGGTGATATCGGCACCAGAAACTCAATCAGCGGCTAGCATAATAGTTGCACAAAGTGAAGTTGAATTTGCTGTGTGTGACTGTTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAAAGAATCAGGGAGAGGTACCATGGAAAATGGGTTTGTGGGTTGTGTGCTGAGGCTGTTAAGGATGAAATTGTAAGGTCTGAGAGGCTTGTTAGCACAGAAGAAGCAATGGCAAAGCATATGAACTTCTGCAAAAAGTTCAAGGCATCCGGGCCTCCTCTAAATCCAACAGTGCACTTGATATCAGCTATGAGACAGATTCTTAGGAGGACTTTGGATTCTCCTAGAGTAAGGTCCACACCAAGTAGTCCAACTAAGACTAACACAGAAATTCATGGTTCTGTGCTTGCAAGGTCTGAGAGCTACTTCTCTACCCTCTCTGGTTCATGA 477 0.4444 MSAPMIIDPMVISAPETQSAASIIVAQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMAKHMNFCKKFKASGPPLNPTVHLISAMRQILRRTLDSPRVRSTPSSPTKTNTEIHGSVLARSESYFSTLSGS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3119 158 MobiDBLite consensus disorder prediction 121 140 - -
Ssu4g3119 158 Pfam Protein of unknown function (DUF1677) 30 119 IPR012876 -
Ssu4g3119 158 MobiDBLite consensus disorder prediction 122 140 - -
Ssu4g3119 158 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 17 155 - -
Ssu4g3119 158 PANTHER OS01G0745000 PROTEIN 17 155 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3119 Ssu-Chr4 79149019 79149495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3119 - - gmx:100803697 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3119 4 79149019 79149495 Ssu4g3119 4 79149019 79149495 ECH
Ssu4g3119 4 79149019 79149495 Ssu1g3574 1 90972059 90972490 ECH
Ssu4g3119 4 79149019 79149495 Ssu5g0505 5 10852248 10852826 ECH