Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3112 ATGGAGAGCCTTCCGGTTGAGACGGCGGAGAAGATCATTCTCCGGTGGGACTCGACGGCGTCGGAGGACGCCCGCGACAAGATGATATTCTCCGGCGACCGCGACGAGGCGGATCTCTACCTCCAGGCGGTGGACGAAATCCAGCGGTCGCTGAGCTCCGTCGCGGTCTCCGACAAAGTCAACTCCGCCATTCAGATCGCCATGGCCCGCTTGGAAGACGAGTTCCGCAACATCCTCATCTCCCACACGAACCCCTTCGACCCCACCACCGAGGACGAGCCCCCCCAGCCCCAGGACCCTCCCTCTTCCACCTCTTCCCCAAAATACCCCCACGACAGCGAAAACGACGACGTCGACAGCACCCAGAACAGCAACGCGAGCGCGCTCTTCCGCTTCAACAGCGACGGCGCCGCCTCCAGCGCCGCCTCCAGCTACCGGTCCACCAGCAGCATCCGCGAGATCGATCTGATCCCCTCGGACGCCGTCTACGACCTCCGCTGCATCGCCGAGCGCATGGTCTCCTCCGGCTACCTGCGCGAGTGCATCCAGGTCTACGGCAGCGTGCGGAAGTCCTCCGTCGACGCGAGCTTCCGCAAGCTCGGAGTCGAGAAGCTCAGCATCGGCGACGTCCAGCGCCTCGAGTGGGAGCAGCTCGAGAACAAAATCAGGCGGTGGATACGAGCCGCGAGGGTCTGCGTCAGAACTCTCTTCGCCAGCGAGAAGAAGCTCTGCGAACAAATCTTCGACGGCGTCGGAACCGCCATCGACGACGCCTGCTTCGTGGAGACCGTGAAAGGCCCCGCCATTCAGCTCTTCAACTTCGCCGAGGCGATCAGCATAAGCCGCCGCTCGCCGGAGAAGTTGTTTAAGATTCTGGATTTGCACGATGCCCTGACCGATTTGATGCCGGATATCGACGTCGTGTTCGATTCCAAGTCCTCGGAGTCGATTAGGGTTCAGGCCGCGGAGATTCTGTCGCGGCTGGGCGAGGCCGCGAGGGGGATTCTGTCCGAGTTTGAGAACGCCGTGCTTAGGGAACCTTCTAGGGTTCCTGTCCCCGGTGGCACGATTCACCCTCTGACTCGGTATGTCATGAATTACATAAGTTTGATCTCTGATTATAAGGTTACTCTGAATGAGCTCATAGTGTCTAAGCCCTCGACGGGGTCTAGGTATTCGGGTGATCCTGGGATACCTGATATGGATTTGGCTGAGTTTGAGGAGAAGAATCCTTTGGCTGTTCACTTGATTTGGATTATTGTGATTTTGCAATTCAACTTGGATGGGAAGAGTAAGCACTATAAGGACACCTCTCTGGCTCACTTGTTTGTCATGAACAACGTGCACTATATTGTTCACAAGGTGAGGGGGAGTCCCGAGTTGAGGGAGATGATTGGGGATGACTATTTGAAGAAGCTGACGGGGAAGTTCCGCCAGGCGGCCACGAGCTACCAGAGGGCCACGTGGGTGAGGGTCTTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGCGGGTTTTCTTCTGGGGTGTCCAAGAGTGCTCTCAGGGAGAGGTTTAAGTCCTTCAACGCCATGTTTGAGGAGGTTCATAGGACTCAGGCGGTTTGGTTCATACCGGATTCGCAGCTCCGGGAGGAGCTAAGGATATCCATATCGGAGAAGCTGATTCCGGCGTACAGGTCGTTTCTCGGCAGGTTCAGGAGCCACATTGAGAGTGGGAGGCATCCGGAGAATTACATTAAGTACTCTGTCGAGGACCTGGAGGATGCTGTTTTGGACTTCTTTGAAGGGATTCCTGTGTCCCAGCACTTGAGGAGGAGATCTGAATGA 1833 0.5696 MESLPVETAEKIILRWDSTASEDARDKMIFSGDRDEADLYLQAVDEIQRSLSSVAVSDKVNSAIQIAMARLEDEFRNILISHTNPFDPTTEDEPPQPQDPPSSTSSPKYPHDSENDDVDSTQNSNASALFRFNSDGAASSAASSYRSTSSIREIDLIPSDAVYDLRCIAERMVSSGYLRECIQVYGSVRKSSVDASFRKLGVEKLSIGDVQRLEWEQLENKIRRWIRAARVCVRTLFASEKKLCEQIFDGVGTAIDDACFVETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTDLMPDIDVVFDSKSSESIRVQAAEILSRLGEAARGILSEFENAVLREPSRVPVPGGTIHPLTRYVMNYISLISDYKVTLNELIVSKPSTGSRYSGDPGIPDMDLAEFEEKNPLAVHLIWIIVILQFNLDGKSKHYKDTSLAHLFVMNNVHYIVHKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKSFNAMFEEVHRTQAVWFIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3112 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 609 IPR004140 GO:0000145|GO:0006887
Ssu4g3112 610 Gene3D Exocyst complex component Exo70 12 606 - -
Ssu4g3112 610 MobiDBLite consensus disorder prediction 82 122 - -
Ssu4g3112 610 MobiDBLite consensus disorder prediction 90 104 - -
Ssu4g3112 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 609 - -
Ssu4g3112 610 Pfam Exo70 exocyst complex subunit 224 592 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu4g3112 610 SUPERFAMILY Cullin repeat-like 34 597 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3112 Ssu-Chr4 79051686 79053518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3112 7 610 EXO70 exocyst subunit family AT1G72470 69.544 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3112 K07195 - gmx:100808671 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3112 4 79051686 79053518 Ssu4g3112 4 79051686 79053518 ECH