Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3081 ATGGCTAGCTTAAGGGTTTCCATGTCTATATTGGCGTTCTATTTGAGCTATTCTATTCTCATGTCTGATTACTCACTTTCCCAAAGCAGCTTCTGCCTGCCGGAAAACCACACAGCCCTATTCATTTTTGGAGACTCATTGTTTGATGTTGGAAACAATGACTACATCAATAGCTCCACTTTTTTACAGGCAAACTTTCCCCCATATGGGGAAACTTTCTTCAAGTATCCCACTGGAAGGTTTTCTGACGGACGTGTGATCCCAGATTTCATTGCTGAGTATGCAAAGTTGTCACTTATTCTACCATACCTTAGTCCAGCCGGATACCATGATCATTACATTTATGGGGTGAATTTTGCATCAGCCGGAGCTGGAGCTCTGGTTGAAACTAATCAAGGACTGAGACATGTTGATAATAGCAAAACACTTGCATTTAGCCATAACGTTGAAAATGCTAGAAGTAGTGTCCCACACTCTATTGAAGAAATCCAGAAATCTTCTTTGAAATCTCAACATCTTACGCTAGGAGAAGATTTGACGTAG 543 0.4088 MASLRVSMSILAFYLSYSILMSDYSLSQSSFCLPENHTALFIFGDSLFDVGNNDYINSSTFLQANFPPYGETFFKYPTGRFSDGRVIPDFIAEYAKLSLILPYLSPAGYHDHYIYGVNFASAGAGALVETNQGLRHVDNSKTLAFSHNVENARSSVPHSIEEIQKSSLKSQHLTLGEDLT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3081 180 Gene3D SGNH hydrolase 29 175 IPR036514 -
Ssu4g3081 180 PANTHER GDSL ESTERASE/LIPASE 5 2 134 - -
Ssu4g3081 180 Pfam GDSL-like Lipase/Acylhydrolase 40 140 IPR001087 GO:0016788
Ssu4g3081 180 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 134 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3081 Ssu-Chr4 78514083 78521233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3081 20 135 Pollen Coat Proteome AT1G75930 40.164 4.64e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3081 - - gmx:100815095 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3081 4 78514083 78521233 Ssu4g3081 4 78514083 78521233 ECH