Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3078 ATGGCTCCGTTTCCCTTCTCCCCCCGCTTCCTCATTTTCCTCTTCTTATTTGCAACACTCACACCCTTACCTTCTTTTTCCGACccagaaaataaaaagacattcaTAATCCAAGTCCATCACGAAACCAAGCCTTCCATATTCCCAACCCACAGACACTGGTACGAGTCCTCCCTCTCTTCCGTTTCCAACACCGCTTCCACTCCCCCCCGCGTAATCCACACGTACGACACCGTTTTCCACGGCTTCTCCGCGAAGCTCTCACCTTCAGAGGCACAGAAGCTACAATCTCTCGGCCACGTCATCACGCTCATACCCGAACAGGTTCGCGTGCCTCACACCACGCGCTCCCCTCAGTTCCTCGGTCTCACCACCGCGGACCGGACCGGGTTGCTCCACGAGACCGATTTCGGGTCGGATCTCGTCATCGGAGTCATCGACACCGGAATCTGGCCGGAGCGCCAGAGCTTCAACGACCGCGACCTCGGCCCCGTTCCGGCCAAGTGGAAGGGCCATTGCGTCGCCGGGAAGGACTTCCCGGCCACGGCCTGCAACCGGAAACTCATCGGGGCGAGGTACTTCTCCGGCGGGTACGAGGCCACCAACGGGAAGATGAACGGGACCACGGAGTACCGCTCGCCGCGGGACTCCGACGGCCACGGCACGCACACGGCGTCGATCGCCGCCGGGAGATACGTGTCGCCGGCGTCCACGCTGGGCTACGCCAAGGGCGTCGCCGCCGGCATGGCGCCGAAGGCGCGGGTGGCGATGTATAAAGTCTGCTGGAACGGCGGCTGCTACGACTCCGACATCCTCGCCGCCTTCGACGCCGCCGTCGCCGACGGAGTCGACGTCGCATCGCTCAGCGTTGGCGGTGTCGTGGTGCCGTACCACCTTGACGTGATTGCCATCGGCGCCTTTGGCGCCGCCTCCGCTGGGGTTTTCGTCTCCGCCTCCGCCGGCAACGGCGGGCCCGGCGGCCTAACGGTGACCAATGTGGCGCCGTGGGTGACCACCGTCGGCGCCGGAACCATAGACCGAGATTTCCCGGCTTATGTGGAGCTTGGAAATGGAAAAATAGTGCCTGGGGTTAGTATTTACGGTGGACCGGGTCTAGCTCCGGGCAAAATGTACCCGATTGTGTATGCGGGTATTGGACAATTTGGTGgtaatggtagtggtgatggttATTCATCTTCACTATGCTTAGAAGGTTCCTTGGATCCCAAGTTTGTGAAGGGGAAAATTGTTGTGTGTGATAGAGGAATTAATTCAAGGGCTGCCAAGGGTGAGGAGGTGAGAAAAAATGGTGGGGTTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTGGTGGCTGATTGCCACGTGTTGCCTGCCACGGCGGTTGGCGCCACCGGCGGCGATGAGATTCGGAGGTACATTGCGGCGGCGGGGAATTTGCGGGCGAATTCTCCGCCAACGGCGACCATTGTGTTTAAGGGGACTAGGCTTGGGGTTAGGCCAGCTCCTGTGGTGGCATCATTTTCAGCCAGAGGGCCTAACCCTGAGTCCCCTGAGATTTTGAAGCCCGATGTTATAGCCCCTGGGCTGAACATTCTTGCTGCTTGGCCCGATCATGTTGGGCCTTCTGGGGTTCCCTCTGACGGGCGCAGGACTGAGTTCAACATTCTCTCTGGGACTTCAATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCACATCCTGATTGGAGTCCTGCTGCTATTAGGTCAGCTTTGATGACCACTGCTTATACTGTGGACAATAGGGGTGATCCCATGTTGGATGAGTCCACTGGGAATGTCTCCTCAGTGTTTGATTATGGTGCTGGCCATGTTCATCCTGAGAAGGCCATGAACCCTGGGTTGGTTTATGATATTTCCACTTCTGATTATGTGAATTTCTTGTGCAATTCTAATTATACCACCAAGAGTATTCATGTGATCACAAGGAAGGATGCAGATTGCAGTGGGGCTAAAAGGGCTGGACATTCTGGGAATTTGAATTACCCTTCACTGTCTGCTGTGTTTCAACAATATGGAAAGAAGAGAATGTCTACACATTTTATTAGGACTGTGACCAATGTTGGGGACCCAAATTCAGTGTACAAGGTCACCATTAGGCCACCAGGTGGACCGGTGGTCACAGTGCAGCCAGACACCCTGACTTTCAGGAGGGTGGGGCAGAAGTTGAACTTTCTTGTTAGGGTACAAACTAGGGCTGTTAAGCTTTCCCCTGGAGGTTCTAGTGTGAAGAGTGGCTCCATAGTTTGGTCCGATGGCAAGCATACTGTCACAAGTCCCCTGGTTGTGACAATGCAGCAGCCTCTGGATTAG 2376 0.5497 MAPFPFSPRFLIFLFLFATLTPLPSFSDPENKKTFIIQVHHETKPSIFPTHRHWYESSLSSVSNTASTPPRVIHTYDTVFHGFSAKLSPSEAQKLQSLGHVITLIPEQVRVPHTTRSPQFLGLTTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRDLGPVPAKWKGHCVAGKDFPATACNRKLIGARYFSGGYEATNGKMNGTTEYRSPRDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARVAMYKVCWNGGCYDSDILAAFDAAVADGVDVASLSVGGVVVPYHLDVIAIGAFGAASAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPAYVELGNGKIVPGVSIYGGPGLAPGKMYPIVYAGIGQFGGNGSGDGYSSSLCLEGSLDPKFVKGKIVVCDRGINSRAAKGEEVRKNGGVGMILANGVFDGEGLVADCHVLPATAVGATGGDEIRRYIAAAGNLRANSPPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDHVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGDPMLDESTGNVSSVFDYGAGHVHPEKAMNPGLVYDISTSDYVNFLCNSNYTTKSIHVITRKDADCSGAKRAGHSGNLNYPSLSAVFQQYGKKRMSTHFIRTVTNVGDPNSVYKVTIRPPGGPVVTVQPDTLTFRRVGQKLNFLVRVQTRAVKLSPGGSSVKSGSIVWSDGKHTVTSPLVVTMQQPLD 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3078 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 113 IPR037045 -
Ssu4g3078 791 CDD Peptidases_S8_3 112 598 IPR034197 -
Ssu4g3078 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 11 790 - -
Ssu4g3078 791 ProSiteProfiles Serine proteases, subtilase domain profile. 118 632 - -
Ssu4g3078 791 Gene3D - 649 787 - -
Ssu4g3078 791 Pfam PA domain 379 472 IPR003137 -
Ssu4g3078 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 11 790 - -
Ssu4g3078 791 CDD PA_subtilisin_like 352 493 - -
Ssu4g3078 791 Pfam Subtilase family 138 614 IPR000209 GO:0006508|GO:0008236
Ssu4g3078 791 Pfam Peptidase inhibitor I9 34 110 IPR010259 -
Ssu4g3078 791 Pfam Fibronectin type-III domain 680 784 IPR041469 -
Ssu4g3078 791 SUPERFAMILY Subtilisin-like 112 636 IPR036852 GO:0004252|GO:0006508
Ssu4g3078 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Ssu4g3078 791 Gene3D Peptidase S8/S53 domain 140 645 IPR036852 GO:0004252|GO:0006508
Ssu4g3078 791 Gene3D - 346 501 - -
Ssu4g3078 791 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Ssu4g3078 791 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Ssu4g3078 791 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3078 Ssu-Chr4 78419269 78421644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3078 34 790 Subtilisin-like Serine Gene Family AT3G14240 77.807 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3078 - - gmx:100808511 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3078 4 78419269 78421644 Ssu4g3078 4 78419269 78421644 ECH