Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3046 ATGGCTTCCTCGTGTGCTTCCTCTGCCGTTGCATCTGTTGCCATCTCCACCCCAAGGCAAGTTTCTCCACGTGCCCATTACTTTTCCCAGAAGAATGGATCAATCTTGGGAACCACAAAAGCTTCTTTTCTTAGTGGGAGGAAACTGAAGGTGAACAATTTTACTGCACCAGTTGGCGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGACCCTGATAGGCCTCTGTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGAGATTTTGGGTTTGATCCTCTAGGTCTTGGATCTGATCCTGAGAGCCTGAGATGGAATGTTCAAGCAGAGCTTGTGCACTGCAGATGGGCCATGTTAGGTGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTATCCTGAACACCCCTTCATGGTATACTGCTGGAGAGTTGGAGTACTTCACAGACACTACCACACTCTTCATAGTTGAGCTCATTTTCATTGGGTGGGCTGAGGGTAGAAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAACACTGACCCCATTTTTCCCAACAACAAGCTCACAGGAACTGAAGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGCTGGGGAAGTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATGGGGGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCTGGCCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA 840 0.5 MASSCASSAVASVAISTPRQVSPRAHYFSQKNGSILGTTKASFLSGRKLKVNNFTAPVGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTEVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3046 279 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 35 279 - -
Ssu4g3046 279 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 35 279 IPR001344 GO:0009765|GO:0016020
Ssu4g3046 279 Pfam Chlorophyll A-B binding protein 83 249 IPR022796 -
Ssu4g3046 279 Gene3D Chlorophyll a/b binding protein domain 84 269 - -
Ssu4g3046 279 SUPERFAMILY Chlorophyll a-b binding protein 69 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3046 Ssu-Chr4 77875356 77877102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3046 55 279 Chloroplast and Mitochondria Gene Families AT3G61470 88.938 1.12e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3046 K08908 - gmx:100784089 534.643