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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ssu4g3030
ATGCCATTCCTTCAGATGCTTCAGAGTGTGGAATCTCCACAGTTTTTCCCTTTGAAAGAGCCAAATTTTCAAACCCTTCTGAGGCTGCAGCACATGAAGAAACCATGGGAAGGAATAGCCTATATTCCGAGAATGGAAGCACAAGTCCAAGCAGCATTGGAGCTAGAGAGTTGTGTGACACATGACATGCTGGACATGCAGTCACCAGTGAAATCAGAAAGCAATGAGCTCCAACACCCGCTTTCAGTTTCATGTGTTGAGAAAGTGAGCTATGAGTGCAACCAGGAACATAACAAAACAGCACAATCAAGCCCCAAATCTCTGCCAGCAGTTGCAAgggaaaggagaaagagaaagagaacaaGACCAAGCAAGAACAAGGAAGATGTGGAGAACCAACGCATGACCCACATTGCCGTTGAACGCAACCGGCGACGCCAAATGAATGACCACCTCAGTGTTCTAAGGTCCCTCATGCCCCCTTCCTACATTCAAAGGGGTGACCAAGCCTCAATAATTGGGGGTGCAATAGATTTTGTGAAGGAGCTGGAGCAATTGCTTCAGTCCCTTGAGGCACAAAAAAGGATGAGAAAGAATGAAGAGGGTGGTGGTTCTTCTTCCAGTAGGGTGTGTaaggcaccaccaccaccatcattatccTTACCACATGGTTATGGAATGAGGTCATCATCCAGTGAAGAAGTGAACTGTGGGGATGAGGTGAAGGCAGAAAACAAGTCAGAGGCAGCAGACATAAAGGTCACCTTGATTCAAACCCATGTGAACTTGAAAATTGAGTGCCAAAGGAGGCCAGGGCAATTGATAAAGGTCATTGTTGCTTTGGAGGACCTTAGGCTAACCATTCTGCACCTCAACATCACCTCCTCAGAGACTTCTGTCCTTTACTCCCTCAATCTCAAGGTATTACTATGTCTTTTCAcctcaattgttttttttttttttttaatgtggtCAACTCTACAAAGTGGAATCAAGTCAGTGTACTATTCTTTTCTGACTTGCAATCTAAGCAAAACCTGCCCCTTCCCTATTTCCAACATTGtctatcattataattataactataaggAGAGTTTCTCTTTggtaaattattactattactattcaTTTAACATTAGAATTTTCCTTGTGCTGGCTGTAGTGCTGTACTACCattacactttttctttttcaatttttggtgatgaataa
1212
0.3861
MPFLQMLQSVESPQFFPLKEPNFQTLLRLQHMKKPWEGIAYIPRMEAQVQAALELESCVTHDMLDMQSPVKSESNELQHPLSVSCVEKVSYECNQEHNKTAQSSPKSLPAVARERRKRKRTRPSKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRKNEEGGGSSSSRVCKAPPPPSLSLPHGYGMRSSSSEEVNCGDEVKAENKSEAADIKVTLIQTHVNLKIECQRRPGQLIKVIVALEDLRLTILHLNITSSETSVLYSLNLKVLLCLFTSIVFFFFLMWSTLQSGIKSVYYSFLTCNLSKTCPFPISNIVYHYNYNYKESFSLVNYYYYYSFNIRIFLVLAVVLYYHYTFSFSIFGDE
403
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ssu4g3030
403
CDD
bHLH_AtFAMA_like
135
208
-
-
Ssu4g3030
403
Pfam
Helix-loop-helix DNA-binding domain
133
184
IPR011598
GO:0046983
Ssu4g3030
403
PANTHER
MAX DIMERIZATION, MAD
1
308
-
-
Ssu4g3030
403
PANTHER
TRANSCRIPTION FACTOR BHLH70
1
308
-
-
Ssu4g3030
403
Coils
Coil
180
200
-
-
Ssu4g3030
403
MobiDBLite
consensus disorder prediction
195
217
-
-
Ssu4g3030
403
Gene3D
-
123
200
IPR036638
GO:0046983
Ssu4g3030
403
SMART
finulus
138
189
IPR011598
GO:0046983
Ssu4g3030
403
MobiDBLite
consensus disorder prediction
96
132
-
-
Ssu4g3030
403
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
132
199
IPR036638
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ssu4g3030
Ssu-Chr4
77428745
77430290
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ssu4g3030
6
329
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT2G46810
41.983
9.73e-69
218
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Ssu4g3030
HLH
3.6e-10
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ssu4g3030
-
-
gmx:100789928
547.74
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ssu4g3030
4
77428745
77430290
Ssu4g3030
4
77428745
77430290
ECH
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