Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3019 ATGTCTTTTAAGATAACAACTTTTGGTACTAAACCAGCACCGAGTGTGGATGTTTACAGTTCCAGAGGGCCATCAAATAGCTGTCCATTTGTGTTGAAACCAGACATCACTGCTCCTGGTACATCAATCTTAGCTGCCTGGCCTCCAAATCTTGAGGTGGCACTGTTTGGATCCCAAAACCTTTTCAGTAACTTCAATTTGTTAACTGGCACATCTATGGCATGCCCTCACGTGGCAGGTGTGGGAGCACTGTTAAAAGGAACACACCCTGATTGGAGTCCTGCAGCTATTAGGTCAGCCATTATGACAACATCGGATATATTTGACAATACTAAGAAACTCATAAAAGACATTGCTGATGATTACAAACCAGCCTCTCCTTTAGCCTTGGGATCTGGTCATGTCAACCCCAACGATGCCCTTGACCCTGGACTTGTTTATGATGTGGGAGTTCAAGACTATGTCAATCTTCTTTGTGCATTGAACTTCACTCAACAGAACATCACGATCATCACTAGATCATCTTCCAATAATTGCTCCAAACCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTTTCTTCAGTGGCAATGGTTCTTCTAATGAGTCAAGGGTAATTTGGGAATTTCAGAGAACGGTGACCAATGTTGGGGAGGGTCAAACAATCTATAATGCTAGCGTTACACCCATCAAAGGGTTTAATGTCAGCATCACCCCAAGCAAGTTGGTGTTCAAGGAAAAGAACGAGAAGCTAAGTTACAAGTTAAGGATTGAAGGTCCAAGTATCGAGGGTTTCGGTTATCTCACTTGGACGGACGTGAAACATGTGGTGAGGAGCCCTATTGtggtcaccaccaccaccctgAACTTCAATTTCTAG 882 0.4218 MSFKITTFGTKPAPSVDVYSSRGPSNSCPFVLKPDITAPGTSILAAWPPNLEVALFGSQNLFSNFNLLTGTSMACPHVAGVGALLKGTHPDWSPAAIRSAIMTTSDIFDNTKKLIKDIADDYKPASPLALGSGHVNPNDALDPGLVYDVGVQDYVNLLCALNFTQQNITIITRSSSNNCSKPSLDLNYPSFIAFFSGNGSSNESRVIWEFQRTVTNVGEGQTIYNASVTPIKGFNVSITPSKLVFKEKNEKLSYKLRIEGPSIEGFGYLTWTDVKHVVRSPIVVTTTTLNFNF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3019 293 Gene3D Peptidase S8/S53 domain 10 154 IPR036852 GO:0004252|GO:0006508
Ssu4g3019 293 Pfam Fibronectin type-III domain 185 284 IPR041469 -
Ssu4g3019 293 Gene3D - 158 287 - -
Ssu4g3019 293 ProSiteProfiles Serine proteases, subtilase domain profile. 1 141 - -
Ssu4g3019 293 Pfam Subtilase family 10 111 IPR000209 GO:0006508|GO:0008236
Ssu4g3019 293 ProSitePatterns Serine proteases, subtilase family, serine active site. 70 80 IPR023828 -
Ssu4g3019 293 SUPERFAMILY Subtilisin-like 14 145 IPR036852 GO:0004252|GO:0006508
Ssu4g3019 293 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 2 287 - -
Ssu4g3019 293 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 287 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3019 Ssu-Chr4 77209371 77210252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3019 1 273 Subtilisin-like Serine Gene Family AT5G67090 50.178 4.56e-80 255