Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3018 ATGGCACTGGTTGGCActgAGAATGGTTCCGCATCCATCATTATTAACCCGAGAAACGGAGAAATTGTCAAAGCTTACATCAAGAGTAACTCTGATACAAAAGCAAGCATGTCTTTTAAGATAACAGCTTTAGGTACTAAACCAGCACCCCGTGTGGATGTTTACAGTTCCAGAGGGCCATCAAATAGCTGTCCATTTGTGTTGAAACCGGACATCACTGCTCCTGGTACATCAATCTTAGCTGCCTGGCCTCCAAATCTTGAGGTGGCACTGTTTGGGTCCCAAAACCTTTTTAGTAACTTCAATTTGTTAACTGGCACATCTATGGCATGCCCTCACGTGGCAGGTGTGGGAGCACTGTTAAAAGGAACACACCCTGATTGGAGTCCTGCAGCTATTAGGTCAGCCATTATGACAACATCGGATATATTTGACAATACTAAGAAACTCATAAAAGACATTGCTGATGATTACAAACCAGCCTCTCCTTTAGCCTTGGGATCTGGTCATGTCAACCCTAACGATGCCCTTGACCCTGGACTTGTTTATGATGTGGGAGTTCAAGACTATGTCAATCTTCTTTGTGCATTGAACTTCACTCAACAGAACATCACGATCATCACTAGATCATCTTCCAATAATTGCTCCAAACCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTTTCTTCAGTGGCAATGATTCTTCTAATGAGTCAAGGGTAATTTGGGAATTTCAGAGAACGGTGACCAATGTTGGGGAGGGTCAAACAATCTATAATGCTAGCGTTACACCCATCAAAGGGTTTAATGTCAGCATCATCCCAAGCAAGTTGGTGTTCAAGGAGGAGAACGAGAAGTTAAGTTACAAGTTAAGGATTGAAGGTCCAAGTATCGAGGGTTTCGGTTATCTCACTTGGACGGACGTGAAACATGTGGTGAGGAGCCCTATTGTGgtcaccaccaccgccaccctCAACTTCAATTTCTAG 993 0.422 MALVGTENGSASIIINPRNGEIVKAYIKSNSDTKASMSFKITALGTKPAPRVDVYSSRGPSNSCPFVLKPDITAPGTSILAAWPPNLEVALFGSQNLFSNFNLLTGTSMACPHVAGVGALLKGTHPDWSPAAIRSAIMTTSDIFDNTKKLIKDIADDYKPASPLALGSGHVNPNDALDPGLVYDVGVQDYVNLLCALNFTQQNITIITRSSSNNCSKPSLDLNYPSFIAFFSGNDSSNESRVIWEFQRTVTNVGEGQTIYNASVTPIKGFNVSIIPSKLVFKEENEKLSYKLRIEGPSIEGFGYLTWTDVKHVVRSPIVVTTTATLNFNF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3018 330 ProSitePatterns Serine proteases, subtilase family, serine active site. 106 116 IPR023828 -
Ssu4g3018 330 Gene3D - 194 323 - -
Ssu4g3018 330 Pfam Subtilase family 39 147 IPR000209 GO:0006508|GO:0008236
Ssu4g3018 330 ProSiteProfiles Serine proteases, subtilase domain profile. 1 177 - -
Ssu4g3018 330 Gene3D Peptidase S8/S53 domain 46 190 IPR036852 GO:0004252|GO:0006508
Ssu4g3018 330 Gene3D - 12 45 - -
Ssu4g3018 330 PANTHER PUTATIVE-RELATED 9 325 - -
Ssu4g3018 330 Pfam Fibronectin type-III domain 221 320 IPR041469 -
Ssu4g3018 330 SUPERFAMILY Subtilisin-like 49 181 IPR036852 GO:0004252|GO:0006508
Ssu4g3018 330 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 325 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3018 Ssu-Chr4 77124345 77128072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3018 15 309 Subtilisin-like Serine Gene Family AT5G67090 48.026 2.19e-82 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3018 - - gmx:100787831 563.918