Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2997 ATGTTGGAGAGTGAAGAAAATAACTTGGAAGAAGTTCCGGTTACAAACCATTACCATATTCCCTGGCCCCACCCCCAGCAGAGAAAGGAAgtggtaattaaaaatataccaaaagGGTTTTTGCCAATCAAGGTGGGGCAAGGTGAAGAGCAACAGAAAATTGTGATGCCTGTTATGCACCTCAACCACCCCTTGTTTTCTCAGCTACTGAAGGAGGCAGAGGAAGAGTATGGTTTTGATCAGCAGGGAACCATAATTATCCCTTGCCATGTGGAGGACTTTAGGTACGTTCAAGACCTCATTCATAAGGAGAAGTCCTCCCAAAACCGCCACCATGTCATAAGCTGTTTTAGGCATTCAcgttaa 366 0.4208 MLESEENNLEEVPVTNHYHIPWPHPQQRKEVVIKNIPKGFLPIKVGQGEEQQKIVMPVMHLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHVEDFRYVQDLIHKEKSSQNRHHVISCFRHSR 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2997 121 Pfam Auxin responsive protein 34 100 IPR003676 GO:0009733
Ssu4g2997 121 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 24 112 - -
Ssu4g2997 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2997 Ssu-Chr4 76587001 76587366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2997 35 101 Calmodulin-binding Proteins AT3G43120 46.269 2.15e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2997 K14488 - gmx:100808516 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2997 4 76587001 76587366 Ssu4g2997 4 76587001 76587366 ECH
Ssu4g2997 4 76587001 76587366 Ssu4g0090 4 1477240 1478034 ECH