Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2994 ATGGCCTCACTCTGGCTCACCATGACTTTGTTCTACTGGTCTCACCCCGGTGGTCCAGCTTGGGGCAAGTACTACTACTCCTTTCATTACTGGAAAAAAGCCAACACAAACACAAGCACCAACAACAACCTTAACCTTCCCTCGGATAATAAAATGATTCCGGGTCCCAAAGGGTACCCTGTGATAGGGAGCATGAACCTCATGGCCTCGCTGGCGCACCACCGAATTGCCGCGGCGGCGCGAGCATGCAACGCGACGAGGCTCATGGCCTTCAGCCTCGGCGACACACGTGCCGTCGTCACGTGCCACCCGGACGTGGCGAAGGAGATTCTCGCGAGCCCCGTCTTCGCCGATCGCCCCGTGAAGGAATCCGCGTACAGCCTCATGTTCAACCGCGCCATCGGGTTCGCCCCCTACGGCGTCTACTGGCGCGCCCTCCGCAGAGTTGCCGCGACCCACCTCTTCTGCCCCAAGCAAATCAAGGCCTCCGAGCTCCAACGCGCCGAAATCGCCGCCCAGATGACCGACTCCTTCCGAAACCGCCGCGGCGACTTCCGCGTCCGCCACGTGCTCAAGAGGGCATCCCTCAATAACATGATGTGGTCCGTGTTTGGACAGAGGTACAGGCTGGACGGCGCAAACAGCGGAATGGACGAGCTATCCCGGTTAGTGGAACAAGGGTACGACCTCTTGGGTACCCTTAATTGGGGAGACCATATCCCTTTCCTCAAAGACTTTGACCTCCAAAAAATACGGTTCACTTGCTCCAAACTCGTCCCCAGAGTGAACCGCTTCGTCGGTTCAATCATCGACGACCACCGAGCCGACGTAACCCAAACCAACCACGATTTCGTTCATGTTTTGCTCTCCCTCCAAGGCCCCGATAAATTGTCTCACCCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGGGGGACCGACACGGTGGCGGTTTTGATCGAGTGGATACTGGCGAGGATGGTGCTTCATCCTGAGGTGCAAAGGACGGTGCAGGAGGAGCTGGACTCGGTGGTTGGTGCTGGTGGGTCACGCGCTTTGACGGAGGAGGATGTGGCGGCGACGGTGTATCTTCCGGCGGTGGTGAAGGAGGTTTTGAGGCTGCACCCTCCGGGCCCGCTTCTCTCGTGGGCCCGGTTGGCCATCACTGATACGACCATTGATGGGTATCACGTGCCCGCGGGGACCACGGCCATGGTTAATATGTGGGCCATAGCGCGGGACCCGGAGGTGTGGGGGGACCCACTTGAATTTACGCCCGAGAGGTTCGTGGCCGGAGAGGCTGAGTTTTCTATTTTCGGGTCGGACCTGAGACTCGCCCCGTTCGGGTCGGGTCGGAGGACCTGCCCCGGGAAGACCTTGGGTTTGACCACTGTGACCTTCTGGGTGGCTAGGCTCTTGCACGAGTTTGAATGGGTACCGTCGGATGAGGAGAATGGGGTTGATCTAACGGAGGTGCTGAGGCTTTCATGTGAAATGGCGAACCCTCTGAGTGTTAAAGTGCGCCCCAGGCGTGGGTTAAGCACTTAA 1551 0.5835 MASLWLTMTLFYWSHPGGPAWGKYYYSFHYWKKANTNTSTNNNLNLPSDNKMIPGPKGYPVIGSMNLMASLAHHRIAAAARACNATRLMAFSLGDTRAVVTCHPDVAKEILASPVFADRPVKESAYSLMFNRAIGFAPYGVYWRALRRVAATHLFCPKQIKASELQRAEIAAQMTDSFRNRRGDFRVRHVLKRASLNNMMWSVFGQRYRLDGANSGMDELSRLVEQGYDLLGTLNWGDHIPFLKDFDLQKIRFTCSKLVPRVNRFVGSIIDDHRADVTQTNHDFVHVLLSLQGPDKLSHPDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQRTVQEELDSVVGAGGSRALTEEDVAATVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIARDPEVWGDPLEFTPERFVAGEAEFSIFGSDLRLAPFGSGRRTCPGKTLGLTTVTFWVARLLHEFEWVPSDEENGVDLTEVLRLSCEMANPLSVKVRPRRGLST 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2994 516 Gene3D Cytochrome P450 47 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PANTHER CYTOCHROME P450 78A7-RELATED 1 513 - -
Ssu4g2994 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Ssu4g2994 516 Pfam Cytochrome P450 54 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2994 516 PANTHER CYTOCHROME P450 78A6 1 513 - -
Ssu4g2994 516 SUPERFAMILY Cytochrome P450 53 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2994 Ssu-Chr4 76480033 76481737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2994 11 515 Cytochrome P450 AT3G61880 67.123 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2994 K20619 - gmx:100798388 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2994 4 76480033 76481737 Ssu4g2994 4 76480033 76481737 ECH